RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 CD101Q93033 1021 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 MTMR9Q96QG7 549 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 CRNKL1Q9BZJ0 848 aaKnown RBP14.82□□□□□ -0.04
PCF11-204ENST00000530660 IKZF4Q9H2S9 585 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 VAT1LQ9HCJ6 419 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 LRRC4BQ9NT99 713 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 RSL24D1Q9UHA3 163 aaKnown RBP14.82□□□□□ -0.04
PCF11-204ENST00000530660 TIMM22Q9Y584 194 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 SORBS3O60504 671 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 ZBED1O96006 694 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 SRGAP2CP0DJJ0 459 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 SRGAP2BP0DMP2 458 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 ATP1A4Q13733 1029 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 PSMD6Q15008 389 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 PDK1Q15118 436 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 HSF5Q4G112 596 aaPredicted RBP14.82□□□□□ -0.04
PCF11-204ENST00000530660 PPP1R2P3Q6NXS1 205 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 AAGABQ6PD74 315 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 SEPT12Q8IYM1 358 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 CCDC127Q96BQ5 260 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 CFAP57Q96MR6 1250 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 SLC38A7Q9NVC3 462 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 UVRAGQ9P2Y5 699 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 DTNAQ9Y4J8 743 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 ADAMTSL3P82987 1691 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 SLIT2O94813 1529 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 K7EPI3 171 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 ITM2AO43736 263 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 ALDH18A1P54886 795 aaKnown RBP14.82□□□□□ -0.04
PCF11-204ENST00000530660 CAMK2BQ13554 666 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 DLGAP5Q15398 846 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 CYTH1Q15438 398 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 OGFOD2Q6N063 350 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 PASD1Q8IV76 773 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 RAVER1Q8IY67 606 aaKnown RBP14.82□□□□□ -0.04
PCF11-204ENST00000530660 RAB3IL1Q8TBN0 382 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 OSBPL6Q9BZF3 934 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 GPR88Q9GZN0 384 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 WNT8AQ9H1J5 351 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 MCM9Q9NXL9 1143 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 NOX1Q9Y5S8 564 aa14.82□□□□□ -0.04
PCF11-204ENST00000530660 PRR5-ARHGAP8B1AHC4 643 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 IL6STP40189 918 aaPredicted RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 SLC5A3P53794 718 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 ARHGAP8P85298 464 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 DMPKQ09013 629 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 PDIA2Q13087 525 aaKnown RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 HIC1Q14526 733 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 ZNF423Q2M1K9 1284 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 NEPROQ6NW34 567 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 BMP2KQ9NSY1 1161 aaPredicted RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 ZNHIT2Q9UHR6 403 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 RSPH10B2B2RC85 870 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 BANF1O75531 89 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 RSPH10BP0C881 870 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 PHKA2P46019 1235 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 EDRF1Q3B7T1 1238 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 ZNF34Q8IZ26 560 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 SLCO2A1Q92959 643 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 ATP6V0A1Q93050 837 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 TTC17Q96AE7 1141 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 BTBD9Q96Q07 612 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 SLC4A9Q96Q91 983 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 GPATCH1Q9BRR8 931 aaKnown RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 DCUN1D5Q9BTE7 237 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 HEMGNQ9BXL5 484 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 PAIP1Q9H074 479 aaKnown RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 GBA3Q9H227 469 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 BCAS3Q9H6U6 928 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 ATAD3AQ9NVI7 634 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 TAGLN3Q9UI15 199 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 TMA7Q9Y2S6 64 aaKnown RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 TMX2-CTNND1H3BSU7 103 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 CRTAMO95727 393 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 KITP10721 976 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 RCVRNP35243 200 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 HOXD13P35453 343 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 KCNQ4P56696 695 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 UBAP2LQ14157 1087 aaKnown RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 DNAL1Q4LDG9 190 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 TMEM119Q4V9L6 283 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 DCDC5Q6ZRR9 648 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 GPBP1Q86WP2 473 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 DZIP1Q86YF9 867 aaKnown RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 ZC3H3Q8IXZ2 948 aaKnown RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 TRIM11Q96F44 468 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 DCUN1D1Q96GG9 259 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 ZMAT2Q96NC0 199 aaKnown RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 SENP1Q9P0U3 644 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 MARCOQ9UEW3 520 aaPredicted RBP14.81□□□□□ -0.04
PCF11-204ENST00000530660 SERPINA10Q9UK55 444 aa14.81□□□□□ -0.04
PCF11-204ENST00000530660 DCCP43146 1447 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 A0A1B0GUL6 1792 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 RREB1Q92766 1687 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 TNFAIP8O95379 198 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 POLR2MP0CAP2 368 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 CPA3P15088 417 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 ACADVLP49748 655 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 NR1H2P55055 460 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 CNGA3Q16281 694 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms