RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 HSP90AA4PQ58FG1 418 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 RTP2Q5QGT7 225 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 TDRD10Q5VZ19 366 aaKnown RBP11.82□□□□□ -0.52
CCDC84-205ENST00000528088 SYCE2Q6PIF2 218 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 FRMD5Q7Z6J6 570 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 FAM114A1Q8IWE2 563 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 ZC3H3Q8IXZ2 948 aaKnown RBP11.82□□□□□ -0.52
CCDC84-205ENST00000528088 LRRC52Q8N7C0 313 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 SUSD3Q96L08 255 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 SENP8Q96LD8 212 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 CNOT6LQ96LI5 555 aaKnown RBP11.82□□□□□ -0.52
CCDC84-205ENST00000528088 MMS19Q96T76 1030 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 CDCA3Q99618 268 aaPredicted RBP11.82□□□□□ -0.52
CCDC84-205ENST00000528088 S1PR5Q9H228 398 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC84-205ENST00000528088 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC84-205ENST00000528088 PRKAG3Q9UGI9 489 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 FAM50BQ9Y247 325 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 SNX9Q9Y5X1 595 aa11.82□□□□□ -0.52
CCDC84-205ENST00000528088 H7C4K7 107 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 PES1O00541 588 aaKnown RBP11.81□□□□□ -0.52
CCDC84-205ENST00000528088 IKBKBO14920 756 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 SRGAP2BP0DMP2 458 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 RPL17P18621 184 aaKnown RBP11.81□□□□□ -0.52
CCDC84-205ENST00000528088 TNNC1P63316 161 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 ANO6Q4KMQ2 910 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 CT47A1Q5JQC4 288 aaPredicted RBP11.81□□□□□ -0.52
CCDC84-205ENST00000528088 ZNF280DQ6N043 979 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 ANKRD54Q6NXT1 300 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 FOXR2Q6PJQ5 311 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 TMEM184AQ6ZMB5 413 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 C11orf57Q6ZUT1 292 aaPredicted RBP11.81□□□□□ -0.52
CCDC84-205ENST00000528088 ANKS3Q6ZW76 656 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 LRFN3Q9BTN0 628 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 C1QTNF1Q9BXJ1 281 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 TMEM8AQ9HCN3 771 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 NXF1Q9UBU9 619 aaKnown RBP11.81□□□□□ -0.52
CCDC84-205ENST00000528088 SIX4Q9UIU6 781 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 DSEQ9UL01 958 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 TSC2P49815 1807 aa11.81□□□□□ -0.52
CCDC84-205ENST00000528088 PLXNA3P51805 1871 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 FSD2A1L4K1 749 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 CNPP09543 421 aaKnown RBP11.8□□□□□ -0.52
CCDC84-205ENST00000528088 FGFR3P22607 806 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 MYL6P60660 151 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 PPP3CAQ08209 521 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 CETN1Q12798 172 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 USP4Q13107 963 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 CTXN3Q4LDR2 81 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 ZNF667Q5HYK9 610 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 KIAA0319Q5VV43 1072 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 KRT39Q6A163 491 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 OVOS1Q6IE37 1185 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 CD300LGQ6UXG3 332 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 DNAJC14Q6Y2X3 702 aaPredicted RBP11.8□□□□□ -0.52
CCDC84-205ENST00000528088 SV2AQ7L0J3 742 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 PALB2Q86YC2 1186 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 RNF168Q8IYW5 571 aaPredicted RBP11.8□□□□□ -0.52
CCDC84-205ENST00000528088 PIK3R5Q8WYR1 880 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 SUSD6Q92537 303 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 CHST7Q9NS84 486 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 NFE2L3Q9Y4A8 694 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCDC84-205ENST00000528088 HCFC2Q9Y5Z7 792 aa11.8□□□□□ -0.52
CCDC84-205ENST00000528088 M0QZQ0 153 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 TEX28O15482 410 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 CST3P01034 146 aaPredicted RBP11.79□□□□□ -0.52
CCDC84-205ENST00000528088 HLA-DRAP01903 254 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 C4BPAP04003 597 aaKnown RBP11.79□□□□□ -0.52
CCDC84-205ENST00000528088 WEE2P0C1S8 567 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 P4HA1P13674 534 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 CPB1P15086 417 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 ATICP31939 592 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 GTF2H1P32780 548 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 AARSP49588 968 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC84-205ENST00000528088 MYL7Q01449 175 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 ENPEPQ07075 957 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 WDR72Q3MJ13 1102 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 ZSCAN23Q3MJ62 389 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 ZACNQ401N2 412 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 ELMSAN1Q6PJG2 1045 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 SCARA5Q6ZMJ2 495 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 PPFIBP1Q86W92 1011 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 THEM5Q8N1Q8 247 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 C12orf76Q8N812 135 aaPredicted RBP11.79□□□□□ -0.52
CCDC84-205ENST00000528088 LNX1Q8TBB1 728 aaPredicted RBP11.79□□□□□ -0.52
CCDC84-205ENST00000528088 KLHL5Q96PQ7 755 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 MUTYHQ9UIF7 546 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 IRAK3Q9Y616 596 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 CDY1Q9Y6F8 540 aa11.79□□□□□ -0.52
CCDC84-205ENST00000528088 MTCL1Q9Y4B5 1905 aaKnown RBP11.78□□□□□ -0.52
CCDC84-205ENST00000528088 BECN2A8MW95 431 aa11.78□□□□□ -0.52
CCDC84-205ENST00000528088 N4BP1O75113 896 aaKnown RBP11.78□□□□□ -0.52
CCDC84-205ENST00000528088 EFEMP2O95967 443 aa11.78□□□□□ -0.52
CCDC84-205ENST00000528088 GLUD1P00367 558 aa11.78□□□□□ -0.52
CCDC84-205ENST00000528088 AFPP02771 609 aaKnown RBP11.78□□□□□ -0.52
CCDC84-205ENST00000528088 TPM2P07951 284 aa11.78□□□□□ -0.52
CCDC84-205ENST00000528088 EPCAMP16422 314 aa11.78□□□□□ -0.52
CCDC84-205ENST00000528088 TYMPP19971 482 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms