RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 PFDN2Q9UHV9 154 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 CDYLQ9Y232 598 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ADCY9O60503 1353 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 STRCQ7RTU9 1775 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 IGF2BP3O00425 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 NEMP1O14524 444 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 RAD51BO15315 384 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 PFKFB2O60825 505 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 VBP1P61758 197 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 ZYXQ15942 572 aaKnown RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF284Q2VY69 593 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TMEM63BQ5T3F8 832 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TYW3Q6IPR3 259 aaKnown RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 LRRC8DQ7L1W4 858 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 ERICH1Q86X53 443 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 COLGALT2Q8IYK4 626 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CACTIN-AS1Q8N1I8 211 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TMEM199Q8N511 208 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 HAVCR1Q96D42 359 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CCDC115Q96NT0 180 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 OSBPL5Q9H0X9 879 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 ZCCHC17Q9NP64 241 aaKnown RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 RAD18Q9NS91 495 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CLCA2Q9UQC9 943 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CHD2O14647 1828 aaKnown RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 FOXP2O15409 715 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 STX11O75558 287 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 APOC1P02654 83 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 HSMCR30P0CW71 290 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF23P17027 643 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 PSMB9P28065 219 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 SRP54P61011 504 aaKnown RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CSNK2BP67870 215 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TUBA4AP68366 448 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 C1orf228Q6PIY5 440 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TOGARAM2Q6ZUX3 1019 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 EFL1Q7Z2Z2 1120 aaKnown RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 RUBCNQ92622 972 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 ZC3H10Q96K80 434 aaKnown RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 MYL10Q9BUA6 226 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 ARMT1Q9H993 441 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 EHD3Q9NZN3 535 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TMCC3Q9ULS5 477 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 PCDHA7Q9UN72 937 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CHKBQ9Y259 395 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TESPA1A2RU30 521 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CCT8L1PA6NM43 557 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TRAF3Q13114 568 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CCSAPQ6IQ19 270 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TAF2Q6P1X5 1199 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 DNAJC7Q99615 494 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 C7orf25Q9BPX7 421 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 KATNAL1Q9BW62 490 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TMEM206Q9H813 350 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 NGRNQ9NPE2 291 aaKnown RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 UBA6A0AVT1 1052 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 A8MXQ7 604 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 PHGDHO43175 533 aaKnown RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TAF5LO75529 589 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 FOSP01100 380 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 ITGA3P26006 1051 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 SFNP31947 248 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CORO7P57737 925 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 PSME3P61289 254 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 AP1S1P61966 158 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CYP27A1Q02318 531 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 ICA1Q05084 483 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 FAM160B1Q5W0V3 765 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 POLNQ7Z5Q5 900 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 EPHX4Q8IUS5 362 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 LRRC17Q8N6Y2 441 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 DGCR14Q96DF8 476 aaKnown RBP7.53□□□□□ -1.2
CTNND1-216ENST00000527467 FOPNLQ96NB1 174 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 MMP19Q99542 508 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 TM6SF1Q9BZW5 370 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 SLITRK6Q9H5Y7 841 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 CD248Q9HCU0 757 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 SYNPO2Q9UMS6 1093 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 AOX1Q06278 1338 aa7.53□□□□□ -1.2
CTNND1-216ENST00000527467 PXDNLA1KZ92 1463 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 GPAA1O43292 621 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 HIST1H2AGP0C0S8 130 aaPredicted RBP7.52□□□□□ -1.2
CTNND1-216ENST00000527467 HIST1H2ADP20671 130 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 SSTR3P32745 418 aaPredicted RBP7.52□□□□□ -1.2
CTNND1-216ENST00000527467 PLA2G4AP47712 749 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 HNMTP50135 292 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 MXI1P50539 228 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 NDUFA8P51970 172 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 SOX10P56693 466 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 DNAJC3Q13217 504 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 RGS21Q2M5E4 152 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 PLEKHH3Q7Z736 793 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 KIF2BQ8N4N8 673 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF579Q8NAF0 562 aaKnown RBP7.52□□□□□ -1.2
CTNND1-216ENST00000527467 OR6P1Q8NGX9 317 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 HIST1H2AHQ96KK5 128 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 ZFRQ96KR1 1074 aaKnown RBP7.52□□□□□ -1.2
CTNND1-216ENST00000527467 XPO6Q96QU8 1125 aaKnown RBP7.52□□□□□ -1.2
CTNND1-216ENST00000527467 HIST1H2AJQ99878 128 aa7.52□□□□□ -1.2
CTNND1-216ENST00000527467 H2AFJQ9BTM1 129 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms