RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 DPP3Q9NY33 737 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 DERAQ9Y315 318 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 C2CD2Q9Y426 696 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 DCLK1O15075 740 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 FAM13AO94988 1023 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 GJB2P29033 226 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 GALK1P51570 392 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 LIMK1P53667 647 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 ZXDBP98169 803 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 GAB4Q2WGN9 574 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 ARMCX5Q6P1M9 558 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 C1orf228Q6PIY5 440 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 ITIH5Q86UX2 942 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 CD302Q8IX05 232 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 PI4K2AQ9BTU6 479 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 ST6GALNAC4Q9H4F1 302 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 ASB7Q9H672 318 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 ABI2Q9NYB9 513 aaPredicted RBP15.41■□□□□ 0.06
CPSF1-201ENST00000526271 KCNG1Q9UIX4 513 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 RALYQ9UKM9 306 aaKnown RBP15.41■□□□□ 0.06
CPSF1-201ENST00000526271 L1RE1Q9UN81 338 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 GON4LQ3T8J9 2241 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 CACNA1GO43497 2377 aa15.41■□□□□ 0.06
CPSF1-201ENST00000526271 TNRC6BQ9UPQ9 1833 aaKnown RBP15.4■□□□□ 0.06
CPSF1-201ENST00000526271 ASCC3Q8N3C0 2202 aaKnown RBP15.4■□□□□ 0.06
CPSF1-201ENST00000526271 H0YCG3 227 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 DPYSL4O14531 572 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 XPOTO43592 962 aaKnown RBP15.4■□□□□ 0.06
CPSF1-201ENST00000526271 RNF40O75150 1001 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 ZNF806P0C7X5 589 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 CDC25CP30307 473 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 TUFMP49411 452 aaKnown RBP15.4■□□□□ 0.06
CPSF1-201ENST00000526271 TAF6P49848 677 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 CASP5P51878 434 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 PLCB2Q00722 1185 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 KYAT1Q16773 422 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 ST3GAL2Q16842 350 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 ARHGAP15Q53QZ3 475 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 ZNF720Q7Z2F6 126 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 SFR1Q86XK3 245 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 PDCL2Q8N4E4 241 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 C1orf127Q8N9H9 656 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 FAM200AQ8TCP9 573 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 SPPL2BQ8TCT7 592 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 EPSTI1Q96J88 318 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 CDK5RAP3Q96JB5 506 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 HHIPQ96QV1 700 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 SIX4Q9UIU6 781 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 AGO2Q9UKV8 859 aaKnown RBP15.4■□□□□ 0.06
CPSF1-201ENST00000526271 NME7Q9Y5B8 376 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.4■□□□□ 0.06
CPSF1-201ENST00000526271 THADAQ6YHU6 1953 aa15.4■□□□□ 0.06
CPSF1-201ENST00000526271 MYO18AQ92614 2054 aaKnown RBP15.39■□□□□ 0.05
CPSF1-201ENST00000526271 RPP40O75818 363 aaKnown RBP15.39■□□□□ 0.05
CPSF1-201ENST00000526271 FGF19O95750 216 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 ACAT1P24752 427 aaKnown RBP15.39■□□□□ 0.05
CPSF1-201ENST00000526271 CYP2F1P24903 491 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 GJA4P35212 333 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 ZNF77Q15935 545 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 DDR2Q16832 855 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 PLK5Q496M5 336 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 ADALQ6DHV7 355 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 CEP68Q76N32 757 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 MON1AQ86VX9 555 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 DNAJC19Q96DA6 116 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 AK8Q96MA6 479 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 CYP2S1Q96SQ9 504 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 DUSP15Q9H1R2 295 aaPredicted RBP15.39■□□□□ 0.05
CPSF1-201ENST00000526271 UPF2Q9HAU5 1272 aaKnown RBP15.39■□□□□ 0.05
CPSF1-201ENST00000526271 GCNT4Q9P109 453 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 CACNA1EQ15878 2313 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 PTPRJQ12913 1337 aa15.39■□□□□ 0.05
CPSF1-201ENST00000526271 CCDC163A0A0D9SF12 145 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 MYMKA6NI61 221 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 KPNA7A9QM74 516 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 SLC26A4O43511 780 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 NOL4O94818 638 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 HNRNPLP14866 589 aaKnown RBP eCLIP15.38■□□□□ 0.05
CPSF1-201ENST00000526271 POLR2BP30876 1174 aaKnown RBP15.38■□□□□ 0.05
CPSF1-201ENST00000526271 MESP2Q0VG99 397 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 USP4Q13107 963 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 PTPAQ15257 358 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 STPG1Q5TH74 334 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 SFTPA1Q8IWL2 248 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 ZC3H10Q96K80 434 aaKnown RBP15.38■□□□□ 0.05
CPSF1-201ENST00000526271 ZHX3Q9H4I2 956 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 TDP1Q9NUW8 608 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 DSEQ9UL01 958 aa15.38■□□□□ 0.05
CPSF1-201ENST00000526271 FAM208BQ5VWN6 2430 aa15.37■□□□□ 0.05
CPSF1-201ENST00000526271 PAX3P23760 479 aa15.37■□□□□ 0.05
CPSF1-201ENST00000526271 UBA7P41226 1012 aa15.37■□□□□ 0.05
CPSF1-201ENST00000526271 ZNF268Q14587 947 aaPredicted RBP15.37■□□□□ 0.05
CPSF1-201ENST00000526271 VEPH1Q14D04 833 aa15.37■□□□□ 0.05
CPSF1-201ENST00000526271 SF3A1Q15459 793 aaKnown RBP15.37■□□□□ 0.05
CPSF1-201ENST00000526271 EML3Q32P44 896 aa15.37■□□□□ 0.05
CPSF1-201ENST00000526271 DYMQ7RTS9 669 aa15.37■□□□□ 0.05
CPSF1-201ENST00000526271 CACNA2D4Q7Z3S7 1137 aa15.37■□□□□ 0.05
CPSF1-201ENST00000526271 LIMS2Q7Z4I7 341 aa15.37■□□□□ 0.05
CPSF1-201ENST00000526271 C2orf15Q8WU43 125 aaKnown RBP15.37■□□□□ 0.05
CPSF1-201ENST00000526271 LEO1Q8WVC0 666 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms