RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ATAD1Q8NBU5 361 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 B3GALNT2Q8NCR0 500 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 KBTBD7Q8WVZ9 684 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 SLC35C1Q96A29 364 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 MYLPFQ96A32 169 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZNF707Q96C28 371 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 FAM81BQ96LP2 452 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 NT5C1BQ96P26 610 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 NECAB3Q96P71 396 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 TMEM209Q96SK2 561 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 RTP3Q9BQQ7 232 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 MRPL45Q9BRJ2 306 aaKnown RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 PI4K2AQ9BTU6 479 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 NT5C1AQ9BXI3 368 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 COL25A1Q9BXS0 654 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 ELOVL4Q9GZR5 314 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 SLITRK6Q9H5Y7 841 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 FAM124BQ9H5Z6 455 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 UXTQ9UBK9 157 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 GTF3C4Q9UKN8 822 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 CDH7Q9ULB5 785 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 SLC27A5Q9Y2P5 690 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 PDCD11Q14690 1871 aaKnown RBP5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 SZT2Q5T011 3432 aa5.76□□□□□ -1.49
HMGB1P40-201ENST00000525121 CDH23Q9H251 3354 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 MYO9BQ13459 2157 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 MYBPHLA2RUH7 354 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 C19orf67A6NJJ6 358 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 C2CD4DB7Z1M9 353 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 LOC730098B7Z3J9 87 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 PMM2O15305 246 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 PAPLNO95428 1278 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CSH1P0DML2 217 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CSH2P0DML3 217 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 HAPLN1P10915 354 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 ALADP13716 330 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 PTPN1P18031 435 aaKnown RBP5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CD58P19256 250 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 LMO2P25791 158 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 EEF1GP26641 437 aaKnown RBP5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CDC25CP30307 473 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 GRIK1P39086 918 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 MAGEA11P43364 429 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 ASPAP45381 313 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 NDST1P52848 882 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CDH8P55286 799 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 TPM4P67936 248 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 MYL5Q02045 173 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 TYRO3Q06418 890 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 KCNH2Q12809 1159 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 MTMR3Q13615 1198 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CUL2Q13617 745 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 MAN2A1Q16706 1144 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CBWD6Q4V339 395 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CBWD3Q5JTY5 395 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CBWD5Q5RIA9 395 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 FKBP15Q5T1M5 1219 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 SPOPLQ6IQ16 392 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 GBP6Q6ZN66 633 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 RBM43Q6ZSC3 357 aaKnown RBP5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 ENOSF1Q7L5Y1 443 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 LIMS2Q7Z4I7 341 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 ACOT1Q86TX2 421 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 OSTM1Q86WC4 334 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 PPM1KQ8N3J5 372 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 MYCBPAPQ8TBZ2 947 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 ING5Q8WYH8 240 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 PSMG2Q969U7 264 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 NXPE3Q969Y0 559 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 SMARCD1Q96GM5 515 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 PCED1BQ96HM7 432 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CEP295NLQ96MC4 621 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 BCO2Q9BYV7 579 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 GPR88Q9GZN0 384 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 INTS2Q9H0H0 1204 aaKnown RBP5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 DMAP1Q9NPF5 467 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 AVENQ9NQS1 362 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 HCFC1R1Q9NWW0 138 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 GDE1Q9NZC3 331 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 GCNT4Q9P109 453 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 IGSF9Q9P2J2 1179 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZMYM5Q9UJ78 669 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CDH22Q9UJ99 828 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 MAGED2Q9UNF1 606 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 COQ4Q9Y3A0 265 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 NFE2L3Q9Y4A8 694 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 ATG2AQ2TAZ0 1938 aa5.75□□□□□ -1.49
HMGB1P40-201ENST00000525121 CHD7Q9P2D1 2997 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 LAMA2P24043 3122 aaKnown RBP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 SMTNL1A8MU46 457 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 BECN2A8MW95 431 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 KCNJ18B7U540 433 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 DPYSL4O14531 572 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 DCXO43602 365 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 HCRTO43612 131 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 ATP2C2O75185 946 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 CILPO75339 1184 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 AP1G2O75843 785 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 SOAT2O75908 522 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms