RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 LMO3Q8TAP4 145 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 SPATA18Q8TC71 538 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 MYLPFQ96A32 169 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 TWNKQ96RR1 684 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 SEPT5Q99719 369 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-224ENST00000523873 CRACR2AQ9BSW2 395 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 PRKD2Q9BZL6 878 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 ZDHHC7Q9NXF8 308 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 CDH9Q9ULB4 789 aa13.7□□□□□ -0.22
VEGFA-224ENST00000523873 LETM1O95202 739 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-224ENST00000523873 LRG1P02750 347 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 PRKCSHP14314 528 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-224ENST00000523873 NDST1P52848 882 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 MYL5Q02045 173 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 APBA1Q02410 837 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 CBX2Q14781 532 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-224ENST00000523873 SMAD2Q15796 467 aaKnown RBP13.69□□□□□ -0.22
VEGFA-224ENST00000523873 MAN2A1Q16706 1144 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 MGAT5BQ3V5L5 792 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 TJAP1Q5JTD0 557 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 ATAT1Q5SQI0 421 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 SDHAF4Q5VUM1 108 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 CDKAL1Q5VV42 579 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 FAM171BQ6P995 826 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 GRASPQ7Z6J2 395 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-224ENST00000523873 ACOT1Q86TX2 421 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 ARHGEF19Q8IW93 802 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 DHX40Q8IX18 779 aaKnown RBP13.69□□□□□ -0.22
VEGFA-224ENST00000523873 KAT5Q92993 513 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 TUBGCP2Q9BSJ2 902 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 INTS2Q9H0H0 1204 aaKnown RBP13.69□□□□□ -0.22
VEGFA-224ENST00000523873 HSD3B7Q9H2F3 369 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 DPP7Q9UHL4 492 aa13.69□□□□□ -0.22
VEGFA-224ENST00000523873 CLDN5O00501 218 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 PMM2O15305 246 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 HNRNPA1P09651 372 aaKnown RBP eCLIP13.68□□□□□ -0.22
VEGFA-224ENST00000523873 FAM163BP0C2L3 166 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 HAPLN1P10915 354 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-224ENST00000523873 PTPN1P18031 435 aaKnown RBP13.68□□□□□ -0.22
VEGFA-224ENST00000523873 ATF6P18850 670 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 SLC9A1P19634 815 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 CYP2F1P24903 491 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 MTHFRP42898 656 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 CYP27A1Q02318 531 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 UVSSAQ2YD98 709 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 PUS10Q3MIT2 529 aaKnown RBP13.68□□□□□ -0.22
VEGFA-224ENST00000523873 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 ZNF394Q53GI3 561 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 TCP11X2Q5H9J9 407 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 MIIPQ5JXC2 388 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 SPATA2LQ8IUW3 424 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-224ENST00000523873 HS6ST3Q8IZP7 471 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 B3GALNT2Q8NCR0 500 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 EHBP1Q8NDI1 1231 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 SPPL2BQ8TCT7 592 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 GPR152Q8TDT2 470 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 WHAMMQ8TF30 809 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 GIPC2Q8TF65 315 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 PCED1BQ96HM7 432 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 RIPOR3Q96MK2 946 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 NT5C1BQ96P26 610 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 ELOVL4Q9GZR5 314 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 GCNT4Q9P109 453 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 CEP72Q9P209 647 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 DNMT3BQ9UBC3 853 aaKnown RBP13.68□□□□□ -0.22
VEGFA-224ENST00000523873 PCDHB5Q9Y5E4 795 aa13.68□□□□□ -0.22
VEGFA-224ENST00000523873 PES1O00541 588 aaKnown RBP13.67□□□□□ -0.22
VEGFA-224ENST00000523873 NRG2O14511 850 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-224ENST00000523873 P4HA2O15460 535 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 PAPLNO95428 1278 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 CCDC130P13994 396 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 EEF1GP26641 437 aaKnown RBP13.67□□□□□ -0.22
VEGFA-224ENST00000523873 HOXA9P31269 272 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 INCA1Q0VD86 236 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 CUL2Q13617 745 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 KRT31Q15323 416 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 NFE2Q16621 373 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-224ENST00000523873 GJB7Q6PEY0 223 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 RRAGAQ7L523 313 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 MYCBPAPQ8TBZ2 947 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 ADAMTS19Q8TE59 1207 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 RPGRIP1Q96KN7 1286 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 B3GNT5Q9BYG0 378 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 ZNF518BQ9C0D4 1074 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 NAT10Q9H0A0 1025 aaKnown RBP13.67□□□□□ -0.22
VEGFA-224ENST00000523873 VPS16Q9H269 839 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 NDST4Q9H3R1 872 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 CYP3A43Q9HB55 503 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 CISHQ9NSE2 258 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 FAM49BQ9NUQ9 324 aa13.67□□□□□ -0.22
VEGFA-224ENST00000523873 CLUHO75153 1309 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 NUP210Q8TEM1 1887 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-224ENST00000523873 XYLBO75191 536 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 CILPO75339 1184 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 ATP1A3P13637 1013 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 BDNFP23560 247 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 ALDH1A3P47895 512 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 ZNF165P49910 485 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 CETN1Q12798 172 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms