RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 TMEM108Q6UXF1 575 aa5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 SPRED1Q7Z699 444 aa5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 GAS2L3Q86XJ1 694 aa5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 TMEM125Q96AQ2 219 aa5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 RNF31Q96EP0 1072 aa5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 COLEC11Q9BWP8 271 aa5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 ALOXE3Q9BYJ1 711 aa5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 UNKLQ9H9P5 680 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 PLCB1Q9NQ66 1216 aa5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 SLC2A4RGQ9NR83 387 aa5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 SSX2IPQ9Y2D8 614 aa5.55□□□□□ -1.52
CTNNA1-238ENST00000523298 PRAMEF33A0A0G2JMD5 474 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 RNASET2O00584 256 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 TOR1BO14657 336 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 PRAMEF10O60809 474 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 A1BGP04217 495 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 ANXA2P07355 339 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 SETSIPP0DME0 302 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 KLRC1P26715 233 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 PPM1AP35813 382 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 TRAPPC10P48553 1259 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 HSPA7P48741 367 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 ANXA11P50995 505 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 PIGFQ07326 219 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 MPEG1Q2M385 716 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 PTCHD3Q3KNS1 767 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 NRN1LQ496H8 165 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 RHOUQ7L0Q8 258 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 FAM109AQ8N4B1 249 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 NELL2Q99435 816 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 HEPHQ9BQS7 1158 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 CRB3Q9BUF7 120 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 MLST8Q9BVC4 326 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 WDR12Q9GZL7 423 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 REXO4Q9GZR2 422 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 VPS11Q9H270 941 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 CXorf36Q9H7Y0 433 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 SERHLQ9NQF3 203 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 TBC1D23Q9NUY8 699 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 ITGB1BP2Q9UKP3 347 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 MTO1Q9Y2Z2 717 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 RAD54BQ9Y620 910 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 COMMD10Q9Y6G5 202 aa5.54□□□□□ -1.52
CTNNA1-238ENST00000523298 TMEM200CA6NKL6 621 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 FOXN3O00409 490 aaPredicted RBP5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 ERN1O75460 977 aaKnown RBP5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 RECQL4O94761 1208 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 NDST3O95803 873 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 CSF1RP07333 972 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 PDHA1P08559 390 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 BTF3P20290 206 aaKnown RBP5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 VAV2P52735 878 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 KCNAB1Q14722 419 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 IQCB1Q15051 598 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 DGKKQ5KSL6 1271 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 C1orf228Q6PIY5 440 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 GPR149Q86SP6 731 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 VGLL2Q8N8G2 317 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 POF1BQ8WVV4 589 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 ASB10Q8WXI3 467 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 SPSB4Q96A44 273 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 ZNF503Q96F45 646 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 BOD1Q96IK1 185 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 PLEKHG4BQ96PX9 1271 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 MED15Q96RN5 788 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 PCGF6Q9BYE7 350 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 TMEM74BQ9NUR3 256 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 ANKFY1Q9P2R3 1169 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 DNMT3BQ9UBC3 853 aaKnown RBP5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 MAN2B2Q9Y2E5 1009 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 HS3ST4Q9Y661 456 aa5.53□□□□□ -1.52
CTNNA1-238ENST00000523298 RAB27BO00194 218 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 RASSF9O75901 435 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 KCNA3P22001 575 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 DDX6P26196 483 aaKnown RBP eCLIP5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 NPTX2P47972 431 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 NDUFV1P49821 464 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 ITGA8P53708 1063 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 WNT3P56703 355 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 MYO1EQ12965 1108 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 ARL13BQ3SXY8 428 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 AMOTQ4VCS5 1084 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 RBM20Q5T481 1227 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 TSHZ1Q6ZSZ6 1077 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 CLNKQ7Z7G1 428 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 SLC30A5Q8TAD4 765 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 SLC25A43Q8WUT9 341 aaPredicted RBP5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 BRI3BPQ8WY22 251 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 LPIN2Q92539 896 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 FUBP1Q96AE4 644 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 IQCDQ96DY2 449 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 MYEOVQ96EZ4 313 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 LRRC46Q96FV0 321 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 SIK2Q9H0K1 926 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 TRMT13Q9NUP7 481 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 RIPOR2Q9Y4F9 1068 aa5.52□□□□□ -1.53
CTNNA1-238ENST00000523298 GAGE12BA1L429 117 aa5.51□□□□□ -1.53
CTNNA1-238ENST00000523298 GAGE12HA6NDE8 117 aa5.51□□□□□ -1.53
CTNNA1-238ENST00000523298 VWC2LB2RUY7 222 aa5.51□□□□□ -1.53
CTNNA1-238ENST00000523298 E7ENX8 843 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms