RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 KLHL28Q9NXS3 571 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.89□□□□□ -0.35
EXTL3-214ENST00000523271 LRRC14BA6NHZ5 514 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 MTSS1O43312 755 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 STAT3P40763 770 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 CCNIQ14094 377 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 RFFLQ8WZ73 363 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 DSN1Q9H410 356 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 QARSP47897 775 aaKnown RBP12.89□□□□□ -0.35
EXTL3-214ENST00000523271 ITGB3BPQ13352 177 aaPredicted RBP12.89□□□□□ -0.35
EXTL3-214ENST00000523271 MTMR1Q13613 665 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
EXTL3-214ENST00000523271 ANKMY2Q8IV38 441 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 OTUD7AQ8TE49 926 aaPredicted RBP12.89□□□□□ -0.35
EXTL3-214ENST00000523271 CNKSR1Q969H4 720 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 ILKAPQ9H0C8 392 aaPredicted RBP12.89□□□□□ -0.35
EXTL3-214ENST00000523271 CAPN10Q9HC96 672 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 WWOXQ9NZC7 414 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 IDH3BO43837 385 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 MGRN1O60291 552 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 MOCS2O96007 188 aaPredicted RBP12.89□□□□□ -0.35
EXTL3-214ENST00000523271 RALGDSQ12967 914 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 DUOXA2Q1HG44 320 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 EIF2S3LQ2VIR3 472 aaKnown RBP12.89□□□□□ -0.35
EXTL3-214ENST00000523271 SCARA3Q6AZY7 606 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 MZT2AQ6P582 158 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 LPCAT2Q7L5N7 544 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 ATG16L2Q8NAA4 619 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 BPIFA3Q9BQP9 254 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 PHF11Q9UIL8 331 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 KPNA5O15131 536 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 RTN2O75298 545 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 ITIH2P19823 946 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 ERFP50548 548 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 KCNH2Q12809 1159 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 KCNT1Q5JUK3 1230 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 EFCAB1Q9HAE3 211 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 AP1S1P61966 158 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 OTUD4Q01804 1114 aaKnown RBP12.88□□□□□ -0.35
EXTL3-214ENST00000523271 CLEC16AQ2KHT3 1053 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 SUGP1Q8IWZ8 645 aaKnown RBP12.88□□□□□ -0.35
EXTL3-214ENST00000523271 IP6K1Q92551 441 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 COMMD8Q9NX08 183 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 PCDHGA3Q9Y5H0 932 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 ABCC4O15439 1325 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 RNF123Q5XPI4 1314 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 TRAF3Q13114 568 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 ATP1A4Q13733 1029 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 SPATA2LQ8IUW3 424 aaPredicted RBP12.88□□□□□ -0.35
EXTL3-214ENST00000523271 C1orf50Q9BV19 199 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 GPR63Q9BZJ6 419 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 NOL6Q9H6R4 1146 aaKnown RBP12.88□□□□□ -0.35
EXTL3-214ENST00000523271 LIMA1Q9UHB6 759 aaKnown RBP12.88□□□□□ -0.35
EXTL3-214ENST00000523271 A0A0D9SFI3 127 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 CCDC182A6NF36 153 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 AP3D1O14617 1153 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 GRK4P32298 578 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 EID3Q8N140 333 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 PADI4Q9UM07 663 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 SSNA1O43805 119 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 SNRPAP09012 282 aaKnown RBP12.88□□□□□ -0.35
EXTL3-214ENST00000523271 ITGA3P26006 1051 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 SOX11P35716 441 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 SULT1E1P49888 294 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 GSPT2Q8IYD1 628 aaKnown RBP12.88□□□□□ -0.35
EXTL3-214ENST00000523271 TRPV3Q8NET8 790 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 OSCP1Q8WVF1 389 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 ZBTB10Q96DT7 871 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 BDH2Q9BUT1 245 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 A2MP01023 1474 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 MICAL3Q7RTP6 2002 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 C1orf232A0A0U1RR37 186 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 ERVK-10P10266 1014 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 LCP1P13796 627 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 ATP6V1B2P21281 511 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 POU1F1P28069 291 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 CRKP46108 304 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 RBBP8NLQ8NC74 664 aaPredicted RBP12.88□□□□□ -0.35
EXTL3-214ENST00000523271 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
EXTL3-214ENST00000523271 ING4Q9UNL4 249 aa12.88□□□□□ -0.35
EXTL3-214ENST00000523271 CCDC162PA2VCL2 907 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 CCT8L1PA6NM43 557 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 ATP9AO75110 1047 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 PHF2O75151 1096 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 AKR1D1P51857 326 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 CAMK2GQ13555 558 aaPredicted RBP12.87□□□□□ -0.35
EXTL3-214ENST00000523271 THNSL1Q8IYQ7 743 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 RBM15Q96T37 977 aaKnown RBP eCLIP12.87□□□□□ -0.35
EXTL3-214ENST00000523271 ACAD9Q9H845 621 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 ATPIF1Q9UII2 106 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 PNMA8BQ9ULN7 279 aaPredicted RBP12.87□□□□□ -0.35
EXTL3-214ENST00000523271 XDHP47989 1333 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 NEURL1BA8MQ27 555 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 TRAF2Q12933 501 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 OLFML2AQ68BL7 652 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 KDELC2Q7Z4H8 507 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 ZNF614Q8N883 585 aa12.87□□□□□ -0.35
EXTL3-214ENST00000523271 SLC39A10Q9ULF5 831 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms