RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 FUBP3Q96I24 572 aaKnown RBP eCLIP10.13□□□□□ -0.794e-28■■■■■ 39.5
SDC2-207ENST00000522911 PKMYT1Q99640 499 aa10.13□□□□□ -0.79
SDC2-207ENST00000522911 LPIN3Q9BQK8 851 aa10.13□□□□□ -0.79
SDC2-207ENST00000522911 TMEM206Q9H813 350 aa10.13□□□□□ -0.79
SDC2-207ENST00000522911 HPS4Q9NQG7 708 aa10.13□□□□□ -0.79
SDC2-207ENST00000522911 RBM12Q9NTZ6 932 aaKnown RBP10.13□□□□□ -0.79
SDC2-207ENST00000522911 PCDHB5Q9Y5E4 795 aa10.13□□□□□ -0.79
SDC2-207ENST00000522911 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.13□□□□□ -0.79
SDC2-207ENST00000522911 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
SDC2-207ENST00000522911 ASPMQ8IZT6 3477 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 FRMD3A2A2Y4 597 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 DCDC2BA2VCK2 349 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 GABRDO14764 452 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 KIAA0391O15091 583 aaKnown RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 SOAT2O75908 522 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 NOL4O94818 638 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 EPN2O95208 641 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 KRT18P05783 430 aaKnown RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 GAP43P17677 238 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 PFKLP17858 780 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 RPL10AP62906 217 aaKnown RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 CYP4F8P98187 520 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 TSPY1Q01534 308 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 TNK2Q07912 1038 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 GRSF1Q12849 480 aaKnown RBP eCLIP10.12□□□□□ -0.79
SDC2-207ENST00000522911 KARSQ15046 597 aaKnown RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 PDGFRLQ15198 375 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 ZC2HC1CQ53FD0 456 aaPredicted RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 PLA2G2CQ5R387 149 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 L1TD1Q5T7N2 865 aaKnown RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 LARP1BQ659C4 914 aaKnown RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 PRR23BQ6ZRT6 265 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 DPH6Q7L8W6 267 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 CACNA2D4Q7Z3S7 1137 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 BRSK2Q8IWQ3 736 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 FAM160A2Q8N612 972 aaPredicted RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 CCDC26Q8TAB7 109 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 USP13Q92995 863 aaPredicted RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 DNAJC19Q96DA6 116 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 ZFYVE19Q96K21 471 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 CNTNAP3BQ96NU0 1288 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 SEPT5Q99719 369 aaPredicted RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 PYM1Q9BRP8 204 aaKnown RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 CNTNAP3Q9BZ76 1288 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 GKN1Q9NS71 199 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 C2orf42Q9NWW7 574 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 EBF1Q9UH73 591 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 ITGA11Q9UKX5 1188 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 EXOC7Q9UPT5 735 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 SMC3Q9UQE7 1217 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 SRPRBQ9Y5M8 271 aaKnown RBP10.12□□□□□ -0.79
SDC2-207ENST00000522911 SCN1AP35498 2009 aa10.12□□□□□ -0.79
SDC2-207ENST00000522911 ANK1P16157 1881 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 TISP43B9A030 160 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 CD2BP2O95400 341 aaKnown RBP10.11□□□□□ -0.79
SDC2-207ENST00000522911 MAGEA11P43364 429 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 LHX1P48742 406 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 SHC2P98077 582 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 GRIN1Q05586 938 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 FAM160A1Q05DH4 1040 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 USP4Q13107 963 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 SF3A1Q15459 793 aaKnown RBP10.11□□□□□ -0.79
SDC2-207ENST00000522911 TAF12Q16514 161 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 FSTL4Q6MZW2 842 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 SYT13Q7L8C5 426 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 PDCL2Q8N4E4 241 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 TOP6BLQ8N6T0 577 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 C1orf127Q8N9H9 656 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 CACTINQ8WUQ7 758 aaKnown RBP10.11□□□□□ -0.79
SDC2-207ENST00000522911 POMGNT1Q8WZA1 660 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 MRPS31Q92665 395 aaKnown RBP10.11□□□□□ -0.79
SDC2-207ENST00000522911 CCL26Q9Y258 94 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 PCDHB13Q9Y5F0 798 aa10.11□□□□□ -0.79
SDC2-207ENST00000522911 DENND4CQ5VZ89 1909 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.1□□□□□ -0.79
SDC2-207ENST00000522911 OTOL1A6NHN0 477 aaPredicted RBP10.1□□□□□ -0.79
SDC2-207ENST00000522911 EXTL3O43909 919 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 HUS1O60921 280 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 TADA3O75528 432 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 RPP40O75818 363 aaKnown RBP10.1□□□□□ -0.79
SDC2-207ENST00000522911 FAM163BP0C2L3 166 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 PDCP20941 246 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 PCSK1P29120 753 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 PDE6CP51160 858 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 MYL7Q01449 175 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 BFSP1Q12934 665 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 CUL4AQ13619 759 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 DHX8Q14562 1220 aaKnown RBP10.1□□□□□ -0.79
SDC2-207ENST00000522911 ZNF77Q15935 545 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 LPAL2Q16609 132 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 PPM1JQ5JR12 505 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 INTS6LQ5JSJ4 861 aaKnown RBP10.1□□□□□ -0.79
SDC2-207ENST00000522911 FAM171BQ6P995 826 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 VSTM1Q6UX27 236 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 CEP68Q76N32 757 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 SFR1Q86XK3 245 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 MAB21L3Q8N8X9 362 aa10.1□□□□□ -0.79
SDC2-207ENST00000522911 OSCP1Q8WVF1 389 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 374.5 ms