RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-220ENST00000522658 LRRIQ4A6NIV6 560 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 CCL16O15467 120 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 TSPAN1O60635 241 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 REC8O95072 547 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 ECEL1O95672 775 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 LRG1P02750 347 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 CYP11A1P05108 521 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 RPL17P18621 184 aaKnown RBP6.88□□□□□ -1.31
PABPC1-220ENST00000522658 STARD6P59095 220 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 CYP4A11Q02928 519 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 DMWDQ09019 674 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 PPP2R5CQ13362 524 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 MAP7Q14244 749 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 HSP90AA2PQ14568 343 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-220ENST00000522658 POU4F3Q15319 338 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 INF2Q27J81 1249 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 PABPC1LQ4VXU2 614 aaKnown RBP6.88□□□□□ -1.31
PABPC1-220ENST00000522658 BMP2KLQ5H9B9 411 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 OGFOD2Q6N063 350 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 ZNF852Q6ZMS4 543 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 PRR23BQ6ZRT6 265 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 ANO5Q75V66 913 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-220ENST00000522658 NEK8Q86SG6 692 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 FERMT3Q86UX7 667 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 TPH2Q8IWU9 490 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 TP53INP2Q8IXH6 220 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 GPR65Q8IYL9 337 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 SLFN12Q8IYM2 578 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 FAM177A1Q8N128 213 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-220ENST00000522658 SLC7A14Q8TBB6 771 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 ETNPPLQ8TBG4 499 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 NELL2Q99435 816 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 KXD1Q9BQD3 176 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 RTKNQ9BST9 563 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 EIF2AQ9BY44 585 aaKnown RBP6.88□□□□□ -1.31
PABPC1-220ENST00000522658 OSBPL6Q9BZF3 934 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 NXF3Q9H4D5 531 aaKnown RBP6.88□□□□□ -1.31
PABPC1-220ENST00000522658 DHX33Q9H6R0 707 aaKnown RBP6.88□□□□□ -1.31
PABPC1-220ENST00000522658 ZSWIM4Q9H7M6 989 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 LIN7BQ9HAP6 207 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 LTB4R2Q9NPC1 389 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 C1GALT1Q9NS00 363 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 ZSCAN32Q9NX65 697 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 FBXW11Q9UKB1 542 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 HES2Q9Y543 173 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 FAM186AA6NE01 2351 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 MYO10Q9HD67 2058 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 CYP3A7-CYP3A51PA0A087WV96 503 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 CASTOR2A6NHX0 329 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 N4BP3O15049 544 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 TRAPPC3O43617 180 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 TBC1D4O60343 1298 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 B4GALT3O60512 393 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 USO1O60763 962 aaKnown RBP6.87□□□□□ -1.31
PABPC1-220ENST00000522658 B3GALT4O96024 378 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 THP07101 528 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 CPA1P15085 419 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 LIG1P18858 919 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 RPS6KB1P23443 525 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 CYP3A7P24462 503 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 AKAP5P24588 427 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 HOXA9P31269 272 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 PTENP60484 403 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 GPC5P78333 572 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 DSC1Q08554 894 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 STK3Q13188 491 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 TUSC3Q13454 348 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 EPHA7Q15375 998 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 ECM1Q16610 540 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 SLC44A4Q53GD3 710 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 FAM171A1Q5VUB5 890 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 PRSS55Q6UWB4 352 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-220ENST00000522658 PARM1Q6UWI2 310 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 ZNF765Q7L2R6 523 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 TAS1R1Q7RTX1 841 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 WFDC3Q8IUB2 231 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 C4orf19Q8IY42 314 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 DCLK2Q8N568 766 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 ST13P5Q8NFI4 369 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-220ENST00000522658 ING5Q8WYH8 240 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 FGF13Q92913 245 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 ZNF707Q96C28 371 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-220ENST00000522658 DYDC2Q96IM9 177 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 B3GALT6Q96L58 329 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 FAM126AQ9BYI3 521 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-220ENST00000522658 C2orf40Q9H1Z8 148 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 SLITRK6Q9H5Y7 841 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 BRD9Q9H8M2 597 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 MINDY3Q9H8M7 445 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 NCOA5Q9HCD5 579 aaKnown RBP6.87□□□□□ -1.31
PABPC1-220ENST00000522658 PRMT7Q9NVM4 692 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-220ENST00000522658 DLL3Q9NYJ7 618 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 NDRG2Q9UN36 371 aaKnown RBP6.87□□□□□ -1.31
PABPC1-220ENST00000522658 MRPS23Q9Y3D9 190 aaKnown RBP6.87□□□□□ -1.31
PABPC1-220ENST00000522658 MIA3Q5JRA6 1907 aa6.87□□□□□ -1.31
PABPC1-220ENST00000522658 ANHXE9PGG2 379 aa6.86□□□□□ -1.31
PABPC1-220ENST00000522658 MAN2B1O00754 1011 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms