RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 PRDX5P30044 214 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 GGT5P36269 586 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 KIR3DL1P43629 444 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 RAD23AP54725 363 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 MLLT6P55198 1093 aaPredicted RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 PCBP3P57721 371 aaKnown RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 ROM1Q03395 351 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 AIMP1Q12904 312 aaKnown RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 CTBP1Q13363 440 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 PUM1Q14671 1186 aaKnown RBP eCLIP4.4□□□□□ -1.711e-10■■□□□ 11.7
SKP1-209ENST00000522552 RAB39AQ14964 217 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 TRIM71Q2Q1W2 868 aaKnown RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 ATPAF1Q5TC12 328 aaPredicted RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 EMC10Q5UCC4 262 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 PRAMEF18Q5VWM3 479 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 RAP1GAP2Q684P5 730 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 RAB12Q6IQ22 244 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 SHQ1Q6PI26 577 aaKnown RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 CYP2R1Q6VVX0 501 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 RSPH3Q86UC2 560 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 VSIG10LQ86VR7 867 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 FAM90A1Q86YD7 464 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 THNSL1Q8IYQ7 743 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 C17orf53Q8N3J3 647 aaPredicted RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 Q8N3U1 123 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 NAT16Q8N8M0 369 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 CDYL2Q8N8U2 506 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 OR56A3Q8NH54 315 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 CPT1CQ8TCG5 803 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 BCL7CQ8WUZ0 217 aaPredicted RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 KCNN1Q92952 543 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 APOPT1Q96IL0 206 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 TMX3Q96JJ7 454 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 C1orf43Q9BWL3 253 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 FOXP3Q9BZS1 431 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 PCDHAC1Q9H158 963 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 TP63Q9H3D4 680 aaPredicted RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 ACSS3Q9H6R3 686 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 ERVMER34-1Q9H9K5 563 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 PDE7BQ9NP56 450 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 HPF1Q9NWY4 346 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 CALCOCO1Q9P1Z2 691 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 C5AR2Q9P296 337 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 MORF4L1Q9UBU8 362 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 ZMYND8Q9ULU4 1186 aaPredicted RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 DERAQ9Y315 318 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 FAM169AQ9Y6X4 670 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.39□□□□□ -1.71
SKP1-209ENST00000522552 VWA3AA6NCI4 1184 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 CCDC69A6NI79 296 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 TMEM233B4DJY2 109 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 PCDH17O14917 1159 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 ADAM20O43506 726 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 OPHN1O60890 802 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 ITGB2P05107 769 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 TXNP10599 105 aaKnown RBP4.39□□□□□ -1.71
SKP1-209ENST00000522552 SRFP11831 508 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 PSMA4P25789 261 aaKnown RBP4.39□□□□□ -1.71
SKP1-209ENST00000522552 TLX1P31314 330 aaPredicted RBP4.39□□□□□ -1.71
SKP1-209ENST00000522552 PGM1P36871 562 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 GPR15P49685 360 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 LIMK1P53667 647 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 RPS3AP61247 264 aaKnown RBP4.39□□□□□ -1.71
SKP1-209ENST00000522552 PSMC6P62333 389 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 HERVK_113P62684 666 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 ZNF200P98182 395 aaPredicted RBP4.39□□□□□ -1.71
SKP1-209ENST00000522552 TNK2Q07912 1038 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 NOLC1Q14978 699 aaKnown RBP eCLIP4.39□□□□□ -1.71
SKP1-209ENST00000522552 SLMAPQ14BN4 828 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 SEC23BQ15437 767 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 GRIK4Q16099 956 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 SLC44A4Q53GD3 710 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 SFRP5Q5T4F7 317 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 FAM69AQ5T7M9 428 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 GADL1Q6ZQY3 521 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 IKBIPQ70UQ0 350 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 ILDR2Q71H61 639 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 KRT28Q7Z3Y7 464 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 ZNF804AQ7Z570 1209 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 TOP6BLQ8N6T0 577 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 GPR156Q8NFN8 814 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 PLEKHO2Q8TD55 490 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 PIGOQ8TEQ8 1089 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 SLC22A17Q8WUG5 538 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 TAF4BQ92750 862 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 UIMC1Q96RL1 719 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 RBM15Q96T37 977 aaKnown RBP eCLIP4.39□□□□□ -1.712e-9■■■□□ 18.8
SKP1-209ENST00000522552 FOXB1Q99853 325 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 FSD1Q9BTV5 496 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 ACAT2Q9BWD1 397 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 GPR62Q9BZJ7 368 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 FTOQ9C0B1 505 aaKnown RBP eCLIP4.39□□□□□ -1.71
SKP1-209ENST00000522552 MUC13Q9H3R2 512 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 POGKQ9P215 609 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 COG5Q9UP83 839 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 HDAC5Q9UQL6 1122 aa4.39□□□□□ -1.71
SKP1-209ENST00000522552 PRR33A8MZF0 331 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 E7EVH7 732 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 STX16-NPEPL1H3BU86 382 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 ACOT7O00154 380 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms