RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CDH9Q9ULB4 789 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 ASB3Q9Y575 518 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 NME7Q9Y5B8 376 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 NUMBLQ9Y6R0 609 aa22.1■■□□□ 1.13
TRIM35-203ENST00000521253 ATP2C2O75185 946 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 MOSPD3O75425 235 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 MICAL2O94851 1124 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 CLSTN1O94985 981 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 PDGFRBP09619 1106 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 FAM163BP0C2L3 166 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 EPB41P11171 864 aaKnown RBP22.09■■□□□ 1.13
TRIM35-203ENST00000521253 CCNE1P24864 410 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 GNL1P36915 607 aaPredicted RBP22.09■■□□□ 1.13
TRIM35-203ENST00000521253 MCCD1P59942 119 aaPredicted RBP22.09■■□□□ 1.13
TRIM35-203ENST00000521253 FKBP3Q00688 224 aaKnown RBP22.09■■□□□ 1.13
TRIM35-203ENST00000521253 ZNF667Q5HYK9 610 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 FAM171BQ6P995 826 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 PARM1Q6UWI2 310 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 DNAJB7Q7Z6W7 309 aaPredicted RBP22.09■■□□□ 1.13
TRIM35-203ENST00000521253 OR6B3Q8NGW1 331 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 FGF14Q92915 247 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 ASIC4Q96FT7 647 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 IPO9Q96P70 1041 aaKnown RBP22.09■■□□□ 1.13
TRIM35-203ENST00000521253 SNX25Q9H3E2 840 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 SMYD3Q9H7B4 428 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 CRTAC1Q9NQ79 661 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 GDE1Q9NZC3 331 aa22.09■■□□□ 1.13
TRIM35-203ENST00000521253 PPP1R3GB7ZBB8 358 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 HLA-DRAP01903 254 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 GJA1P17302 382 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 PPP1R2P41236 205 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 VEPH1Q14D04 833 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 SGSM1Q2NKQ1 1148 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 KLHL10Q6JEL2 608 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 HFE2Q6ZVN8 426 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 ITIH5Q86UX2 942 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 SLC44A3Q8N4M1 653 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 FAM200AQ8TCP9 573 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 RPP25Q9BUL9 199 aaKnown RBP22.08■■□□□ 1.13
TRIM35-203ENST00000521253 MMRN2Q9H8L6 949 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 ZNF334Q9HCZ1 680 aaPredicted RBP22.08■■□□□ 1.13
TRIM35-203ENST00000521253 ABCB6Q9NP58 842 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 DUSP12Q9UNI6 340 aa22.08■■□□□ 1.13
TRIM35-203ENST00000521253 SLC16A3O15427 465 aaKnown RBP22.07■■□□□ 1.12
TRIM35-203ENST00000521253 NARSO43776 548 aaKnown RBP22.07■■□□□ 1.12
TRIM35-203ENST00000521253 ASS1P00966 412 aaKnown RBP22.07■■□□□ 1.12
TRIM35-203ENST00000521253 CYP2F1P24903 491 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 PIK3CAP42336 1068 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 GPR15P49685 360 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 CDH8P55286 799 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 CFAP221Q4G0U5 840 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 SCARA5Q6ZMJ2 495 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 MTSS1LQ765P7 747 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 SPATA2LQ8IUW3 424 aaPredicted RBP22.07■■□□□ 1.12
TRIM35-203ENST00000521253 SHKBP1Q8TBC3 707 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 GPR152Q8TDT2 470 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 TAS1R2Q8TE23 839 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 GIPC2Q8TF65 315 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 TAF4BQ92750 862 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 TMEM8AQ9HCN3 771 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 KIAA1468Q9P260 1216 aa22.07■■□□□ 1.12
TRIM35-203ENST00000521253 A0A1W2PRU2 124 aa22.06■■□□□ 1.12
TRIM35-203ENST00000521253 RAP1GAPP47736 663 aa22.06■■□□□ 1.12
TRIM35-203ENST00000521253 TEAD2Q15562 447 aa22.06■■□□□ 1.12
TRIM35-203ENST00000521253 SPOPLQ6IQ16 392 aa22.06■■□□□ 1.12
TRIM35-203ENST00000521253 NELFBQ8WX92 580 aa22.06■■□□□ 1.12
TRIM35-203ENST00000521253 MYLPFQ96A32 169 aa22.06■■□□□ 1.12
TRIM35-203ENST00000521253 FUBP3Q96I24 572 aaKnown RBP eCLIP22.06■■□□□ 1.12
TRIM35-203ENST00000521253 DPEP3Q9H4B8 488 aa22.06■■□□□ 1.12
TRIM35-203ENST00000521253 A8MXQ7 604 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 P4HA1P13674 534 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 GTF2H1P32780 548 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 MAPRE1Q15691 268 aaKnown RBP22.05■■□□□ 1.12
TRIM35-203ENST00000521253 DDR2Q16832 855 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 SDHAF4Q5VUM1 108 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 KRT39Q6A163 491 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 TTI2Q6NXR4 508 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 C4orf50Q6ZRC1 276 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 GAREM2Q75VX8 874 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 MYCBPAPQ8TBZ2 947 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 PBXIP1Q96AQ6 731 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 ZSWIM3Q96MP5 696 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 DUSP9Q99956 384 aaKnown RBP22.05■■□□□ 1.12
TRIM35-203ENST00000521253 KXD1Q9BQD3 176 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 SDCBP2Q9H190 292 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.05■■□□□ 1.12
TRIM35-203ENST00000521253 CTNND2Q9UQB3 1225 aa22.05■■□□□ 1.12
TRIM35-203ENST00000521253 PTPN1P18031 435 aaKnown RBP22.04■■□□□ 1.12
TRIM35-203ENST00000521253 GABRR2P28476 465 aa22.04■■□□□ 1.12
TRIM35-203ENST00000521253 MXI1P50539 228 aa22.04■■□□□ 1.12
TRIM35-203ENST00000521253 TAF12Q16514 161 aa22.04■■□□□ 1.12
TRIM35-203ENST00000521253 MDH1BQ5I0G3 518 aa22.04■■□□□ 1.12
TRIM35-203ENST00000521253 FAM78AQ5JUQ0 283 aa22.04■■□□□ 1.12
TRIM35-203ENST00000521253 BMP8AQ7Z5Y6 402 aa22.04■■□□□ 1.12
TRIM35-203ENST00000521253 TRIML1Q8N9V2 468 aa22.04■■□□□ 1.12
TRIM35-203ENST00000521253 STKLD1Q8NE28 680 aa22.04■■□□□ 1.12
TRIM35-203ENST00000521253 PCED1BQ96HM7 432 aa22.04■■□□□ 1.12
TRIM35-203ENST00000521253 APOBEC3GQ9HC16 384 aaKnown RBP22.04■■□□□ 1.12
TRIM35-203ENST00000521253 LMBRD1Q9NUN5 540 aa22.04■■□□□ 1.12
TRIM35-203ENST00000521253 MAGEC2Q9UBF1 373 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms