RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CFHP08603 1231 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 FGFR1P11362 822 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 HSPA1LP34931 641 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 PTPRN2Q92932 1015 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 MKL1Q969V6 931 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 GORASP1Q9BQQ3 440 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 CLRN2A0PK11 232 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 DSG3P32926 999 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 MTMR1Q13613 665 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 SGSM1Q2NKQ1 1148 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 LDHDQ86WU2 507 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 APLFQ8IW19 511 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 ACTL9Q8TC94 416 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 SH3TC2Q8TF17 1288 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 NRG4Q8WWG1 115 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 AVENQ9NQS1 362 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 MAGEB2O15479 319 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 MUTP22033 750 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 NPTX2P47972 431 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 MAMLD1Q13495 774 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 MAP7Q14244 749 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 SCARA5Q6ZMJ2 495 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 SPOCD1Q6ZMY3 1216 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 GPD1LQ8N335 351 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 KCTD17Q8N5Z5 321 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 FAM71DQ8N9W8 422 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 MXRA8Q9BRK3 442 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 MECRQ9BV79 373 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 NAV1Q8NEY1 1877 aa13.45□□□□□ -0.26
TRAPPC9-208ENST00000520857 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 H7C0C1 242 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 ALOX15BO15296 676 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 STAM2O75886 525 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 ATP5OP48047 213 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 GPC3P51654 580 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 VCPP55072 806 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 OTUD4Q01804 1114 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 FAAP100Q0VG06 881 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 AP1B1Q10567 949 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 CYP4A22Q5TCH4 519 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 FAM43BQ6ZT52 329 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 NUDCD3Q8IVD9 361 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 KATNAL2Q8IYT4 538 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 STX18Q9P2W9 335 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 SCN7AQ01118 1682 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 TRIM49D1C9J1S8 452 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 PSMA2P25787 234 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 OCRLQ01968 901 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 MCL1Q07820 350 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 ANKRD22Q5VYY1 191 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 RIPOR1Q6ZS17 1223 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 ENOSF1Q7L5Y1 443 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 CRLF3Q8IUI8 442 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 HSPH1Q92598 858 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 EZH1Q92800 747 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 ALKBH8Q96BT7 664 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 ZNF212Q9UDV6 495 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 SRCAPQ6ZRS2 3230 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 PFDN1O60925 122 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 LYNP07948 512 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 PSMC5P62195 406 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 ZNF200P98182 395 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 CYP24A1Q07973 514 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 ASPHQ12797 758 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 CHI3L2Q15782 390 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 SEZ6Q53EL9 994 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 DARS2Q6PI48 645 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 PPIL6Q8IXY8 311 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 PHC3Q8NDX5 983 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 PYDC1Q8WXC3 89 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 NMD3Q96D46 503 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 GMCL1Q96IK5 515 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 SHOC2Q9UQ13 582 aa13.44□□□□□ -0.26
TRAPPC9-208ENST00000520857 KLRC2P26717 231 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 GCAP28676 217 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 AQP5P55064 265 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 MED21Q13503 144 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 RABGAP1LQ5R372 815 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 ANKS1BQ7Z6G8 1248 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 ALLCQ8N6M5 410 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 POU5F2Q8N7G0 328 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 AGBL1Q96MI9 1066 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 EPAS1Q99814 870 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 LRRIQ4A6NIV6 560 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 TM9SF1O15321 606 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 TYROBPO43914 113 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 PYGLP06737 847 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 ANPEPP15144 967 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 ITGB5P18084 799 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 ADSSP30520 456 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 BMPR2Q13873 1038 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 C15orf52Q6ZUT6 534 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 SLITRK1Q96PX8 696 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 TRAPPC9Q96Q05 1148 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 RIT2Q99578 217 aa13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 ASCC2Q9H1I8 757 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC9-208ENST00000520857 VPS11Q9H270 941 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms