RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 LAMP2P13473 410 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 PIK3CAP42336 1068 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 MXI1P50539 228 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 PRSS36Q5K4E3 855 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 CYP4A22Q5TCH4 519 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 VSTM1Q6UX27 236 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 CRYBG2Q8N1P7 616 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 SYT15Q9BQS2 421 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 SRRTQ9BXP5 876 aaKnown RBP17.4■□□□□ 0.38
TNPO1-212ENST00000520850 LRRC3Q9BY71 257 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 GPR88Q9GZN0 384 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 TMLHEQ9NVH6 421 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 GTF3C4Q9UKN8 822 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 CDH7Q9ULB5 785 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 POLIQ9UNA4 740 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 CTNND2Q9UQB3 1225 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 SLC27A5Q9Y2P5 690 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 NOTCH4Q99466 2003 aa17.4■□□□□ 0.38
TNPO1-212ENST00000520850 MYBPHLA2RUH7 354 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 SOBPA7XYQ1 873 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 DCXO43602 365 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 CCDC192P0DO97 292 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 RPL10AP62906 217 aaKnown RBP17.39■□□□□ 0.37
TNPO1-212ENST00000520850 INCA1Q0VD86 236 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 SMYD5Q6GMV2 418 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 DNAJB7Q7Z6W7 309 aaPredicted RBP17.39■□□□□ 0.37
TNPO1-212ENST00000520850 TRIM59Q8IWR1 403 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 OR6B3Q8NGW1 331 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 TNIP3Q96KP6 325 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 MED15Q96RN5 788 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 DNAJC25Q9H1X3 360 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 MAGEC2Q9UBF1 373 aaPredicted RBP17.39■□□□□ 0.37
TNPO1-212ENST00000520850 ZMYM5Q9UJ78 669 aa17.39■□□□□ 0.37
TNPO1-212ENST00000520850 ANHXE9PGG2 379 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 PTPN1P18031 435 aaKnown RBP17.38■□□□□ 0.37
TNPO1-212ENST00000520850 ACAT1P24752 427 aaKnown RBP17.38■□□□□ 0.37
TNPO1-212ENST00000520850 ASPAP45381 313 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 NOP14P78316 857 aaKnown RBP17.38■□□□□ 0.37
TNPO1-212ENST00000520850 CETN1Q12798 172 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 MGAT5BQ3V5L5 792 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 CCDC40Q4G0X9 1142 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 WDR44Q5JSH3 913 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 TCERG1LQ5VWI1 586 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 PDZD4Q76G19 769 aaPredicted RBP17.38■□□□□ 0.37
TNPO1-212ENST00000520850 SPATA2LQ8IUW3 424 aaPredicted RBP17.38■□□□□ 0.37
TNPO1-212ENST00000520850 UBALD2Q8IYN6 164 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 FGF13Q92913 245 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 MYADMQ96S97 322 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 DNAI2Q9GZS0 605 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 NIF3L1Q9GZT8 377 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 CRTAC1Q9NQ79 661 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 ASAH2Q9NR71 780 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 HCFC1R1Q9NWW0 138 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 LIMD1Q9UGP4 676 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 MRPS23Q9Y3D9 190 aaKnown RBP17.38■□□□□ 0.37
TNPO1-212ENST00000520850 NME7Q9Y5B8 376 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 CUL9Q8IWT3 2517 aa17.38■□□□□ 0.37
TNPO1-212ENST00000520850 DOCK6Q96HP0 2047 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 DOCK8Q8NF50 2099 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 A8MXQ7 604 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 PDGFRBP09619 1106 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 ATF6P18850 670 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 TRIM21P19474 475 aaKnown RBP17.37■□□□□ 0.37
TNPO1-212ENST00000520850 GBP2P32456 591 aaPredicted RBP17.37■□□□□ 0.37
TNPO1-212ENST00000520850 FMO5P49326 533 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 CDH8P55286 799 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 STX17P56962 302 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 VEPH1Q14D04 833 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 PTPN21Q16825 1174 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 CBWD6Q4V339 395 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 CBWD3Q5JTY5 395 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 CBWD5Q5RIA9 395 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 B3GALNT2Q8NCR0 500 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 EDAQ92838 391 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 SEMA4DQ92854 862 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 SPATA17Q96L03 361 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 MYRFLQ96LU7 910 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 CORO1BQ9BR76 489 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 APOBEC3GQ9HC16 384 aaKnown RBP17.37■□□□□ 0.37
TNPO1-212ENST00000520850 ABI2Q9NYB9 513 aaPredicted RBP17.37■□□□□ 0.37
TNPO1-212ENST00000520850 SORCS3Q9UPU3 1222 aa17.37■□□□□ 0.37
TNPO1-212ENST00000520850 ATP2C2O75185 946 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 CSH1P0DML2 217 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 CSH2P0DML3 217 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 WEE1P30291 646 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 NTHL1P78549 312 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 DPCR1Q3MIW9 517 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 DCAF17Q5H9S7 520 aaPredicted RBP17.36■□□□□ 0.37
TNPO1-212ENST00000520850 TMC8Q8IU68 726 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 NPAS3Q8IXF0 933 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 TTC9BQ8N6N2 239 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 ITFG1Q8TB96 612 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 KHSRPQ92945 711 aaKnown RBP eCLIP17.36■□□□□ 0.373e-6■□□□□ 9.4
TNPO1-212ENST00000520850 TRMT2BQ96GJ1 504 aaKnown RBP17.36■□□□□ 0.37
TNPO1-212ENST00000520850 PCED1BQ96HM7 432 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 SEPT5Q99719 369 aaPredicted RBP17.36■□□□□ 0.37
TNPO1-212ENST00000520850 PI4K2AQ9BTU6 479 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 C1QTNF1Q9BXJ1 281 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 SDCBP2Q9H190 292 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 THAP9Q9H5L6 903 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms