RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	NDST3	O95803	873 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	FCER1A	P12319	257 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	C6	P13671	934 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	IL1R2	P27930	398 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	GABRB3	P28472	473 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	BLMH	Q13867	455 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	NPY5R	Q15761	445 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	FANCB	Q8NB91	859 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	GLIS1	Q8NBF1	620 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	RAPGEF4	Q8WZA2	1011 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	LRRC46	Q96FV0	321 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	PHACTR3	Q96KR7	559 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	SCLT1	Q96NL6	688 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	CNPPD1	Q9BV87	410 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	EIF2A	Q9BY44	585 aa	Known RBP	4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	OBP2B	Q9NPH6	170 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	TM7SF3	Q9NS93	570 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	HESX1	Q9UBX0	185 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ZNF212	Q9UDV6	495 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	CAPN11	Q9UMQ6	739 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ZFR2	Q9UPR6	939 aa	Known RBP	4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	DGKB	Q9Y6T7	804 aa		4.25	□□□□□ -1.73
EFCAB13-208	ENST00000520776	FAM234B	A2RU67	622 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	LEFTY2	O00292	366 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	KCNQ3	O43525	872 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	AKAP8	O43823	692 aa	Known RBP	4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	FZD7	O75084	574 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	VPS4B	O75351	444 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	RASSF9	O75901	435 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	IPO13	O94829	963 aa	Known RBP	4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	MYL4	P12829	197 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	MGAT1	P26572	445 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	VIPR2	P41587	438 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	RABGGTB	P53611	331 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	WNT3	P56703	355 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	PRKD1	Q15139	912 aa	Predicted RBP	4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ZACN	Q401N2	412 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ZNF585A	Q6P3V2	769 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	KRT28	Q7Z3Y7	464 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	POLN	Q7Z5Q5	900 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	GAS2L3	Q86XJ1	694 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ZNF354C	Q86Y25	554 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	CACNA2D3	Q8IZS8	1091 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	D2HGDH	Q8N465	521 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	NSUN7	Q8NE18	718 aa	Known RBP	4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	MUL1	Q969V5	352 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	WWC2-AS2	Q96NR7	200 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	IGSF9	Q9P2J2	1179 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	GPR52	Q9Y2T5	361 aa		4.24	□□□□□ -1.73
EFCAB13-208	ENST00000520776	LGALS16	A8MUM7	142 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	SKAP2	O75563	359 aa	Predicted RBP	4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	COMT	P21964	271 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	RAB30	Q15771	203 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	AGAP9	Q5VTM2	703 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	TSHZ3	Q63HK5	1081 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	FCRL6	Q6DN72	434 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776		Q6ZSN1	163 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	KIAA0408	Q6ZU52	694 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	SPRED1	Q7Z699	444 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	YAF2	Q8IY57	180 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	MB21D1	Q8N884	522 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	POC1B	Q8TC44	478 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ZNF384	Q8TF68	577 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	TBC1D20	Q96BZ9	403 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	MIEF2	Q96C03	454 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	NELL2	Q99435	816 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ISCA1	Q9BUE6	129 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	MYLK2	Q9H1R3	596 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	HSFX1	Q9UBD0	423 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	GRHPR	Q9UBQ7	328 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ATP11B	Q9Y2G3	1177 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	POLRMT	O00411	1230 aa	Known RBP	4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	CYP2C9	P11712	490 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	XRCC6	P12956	609 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	VEGFA	P15692	232 aa	Predicted RBP	4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	SERPINF1	P36955	418 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	COPA	P53621	1224 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	PTK2B	Q14289	1009 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	SPARCL1	Q14515	664 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	SLC29A2	Q14542	456 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	IQCB1	Q15051	598 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	PLA1A	Q53H76	456 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	NAIF1	Q69YI7	327 aa	Predicted RBP	4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	PLAG1	Q6DJT9	500 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	SLC30A10	Q6XR72	485 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	USP49	Q70CQ1	688 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	HTR3D	Q70Z44	454 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ZNF280B	Q86YH2	543 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	RHOT2	Q8IXI1	618 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776		Q8NA96	180 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ATG16L2	Q8NAA4	619 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ZNF483	Q8TF39	744 aa	Predicted RBP	4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	FAM89A	Q96GI7	184 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	SLC46A1	Q96NT5	459 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	RMDN3	Q96TC7	470 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	MNT	Q99583	582 aa		4.23	□□□□□ -1.73
EFCAB13-208	ENST00000520776	ZNF747	Q9BV97	191 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms