RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	CFAP97	Q9P2B7	532 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	XPR1	Q9UBH6	696 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	PCDHGB4	Q9UN71	923 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	ATP11B	Q9Y2G3	1177 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	RSF1	Q96T23	1441 aa	Predicted RBP	4.09	□□□□□ -1.76
SREK1-208	ENST00000520580		J3KTA2	159 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	COQ9	O75208	318 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	GJB3	O75712	270 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	KLHL18	O94889	574 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	STARD3NL	O95772	234 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	HMGCR	P04035	888 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	C8B	P07358	591 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	IL2RB	P14784	551 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	EFR3A	Q14156	821 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	NR1I3	Q14994	352 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	CPSF6	Q16630	551 aa	Known RBP eCLIP	4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	FAXC	Q5TGI0	409 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	CACHD1	Q5VU97	1274 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	TMEM200B	Q69YZ2	307 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	FCRL6	Q6DN72	434 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	ZNF529	Q6P280	563 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	DPP8	Q6V1X1	898 aa	Predicted RBP	4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	RASGRP2	Q7LDG7	609 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	KRT28	Q7Z3Y7	464 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	USP37	Q86T82	979 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	ZNF280B	Q86YH2	543 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	IRF2BP1	Q8IU81	584 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	TBC1D22A	Q8WUA7	517 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	LSM14B	Q9BX40	385 aa	Known RBP	4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	TTYH3	Q9C0H2	523 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	VPS16	Q9H269	839 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	NCDN	Q9UBB6	729 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	HSF4	Q9ULV5	492 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	DNAJC16	Q9Y2G8	782 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	PLEKHM1	Q9Y4G2	1056 aa		4.09	□□□□□ -1.76
SREK1-208	ENST00000520580	LMTK3	Q96Q04	1460 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	LOC102723971	A0A1B0GUV8	181 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580		E7EVH7	732 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	PIM1	P11309	404 aa	Predicted RBP	4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	HOXD13	P35453	343 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	RRAD	P55042	308 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	NCKAP1L	P55160	1127 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	ARF3	P61204	181 aa	Predicted RBP	4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	RAP2B	P61225	183 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	ARF1	P84077	181 aa	Known RBP	4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	TAF11	Q15544	211 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	TARBP2	Q15633	366 aa	Known RBP	4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	GPR68	Q15743	365 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	MFSD14B	Q5SR56	506 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	UTP14C	Q5TAP6	766 aa	Known RBP	4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	ZKSCAN2	Q63HK3	967 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	NFRKB	Q6P4R8	1299 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	RASGRP3	Q8IV61	690 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	NRSN1	Q8IZ57	195 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	TMIE	Q8NEW7	156 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	IL17RD	Q8NFM7	739 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	ZNF384	Q8TF68	577 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	CASKIN2	Q8WXE0	1202 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	NEIL1	Q96FI4	390 aa	Predicted RBP	4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	PPP1R9B	Q96SB3	815 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	MRI1	Q9BV20	369 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	RNF32	Q9H0A6	362 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	SIL1	Q9H173	461 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	RNPEP	Q9H4A4	650 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	RMI1	Q9H9A7	625 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	TPSG1	Q9NRR2	321 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	NSMCE4A	Q9NXX6	385 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	MOCS1	Q9NZB8	636 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	CAMK2A	Q9UQM7	478 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	SLC5A6	Q9Y289	635 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	ATRNL1	Q5VV63	1379 aa		4.08	□□□□□ -1.76
SREK1-208	ENST00000520580	CDHR4	A6H8M9	788 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	C2orf78	A6NCI8	922 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	PABPN1L	A6NDY0	278 aa	Known RBP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	KCNQ3	O43525	872 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	RASAL1	O95294	804 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	MED26	O95402	600 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	GAST	P01350	101 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	HPX	P02790	462 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	CSF1	P09603	554 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	GYPE	P15421	78 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	KIR2DL3	P43628	341 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	ERVFRD-1	P60508	538 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	ARHGEF7	Q14155	803 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	TBCE	Q15813	527 aa	Predicted RBP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	SLC5A9	Q2M3M2	681 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	RILPL1	Q5EBL4	403 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	FYB2	Q5VWT5	728 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	SNX32	Q86XE0	403 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	OR5M3	Q8NGP4	307 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	ADAMTS15	Q8TE58	950 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	ATP6V1E2	Q96A05	226 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	YME1L1	Q96TA2	773 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	TREX2	Q9BQ50	279 aa	Predicted RBP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	SLF1	Q9BQI6	1058 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	REEP2	Q9BRK0	252 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	CPEB1	Q9BZB8	566 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms