RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 HHIPQ96QV1 700 aa7.09□□□□□ -1.27
CTNNA1-217ENST00000519634 TSPAN10Q9H1Z9 355 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-217ENST00000519634 THG1LQ9NWX6 298 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-217ENST00000519634 KLK13Q9UKR3 277 aa7.09□□□□□ -1.27
CTNNA1-217ENST00000519634 YIPF1Q9Y548 306 aa7.09□□□□□ -1.27
CTNNA1-217ENST00000519634 USP3Q9Y6I4 520 aa7.09□□□□□ -1.27
CTNNA1-217ENST00000519634 MYH15Q9Y2K3 1946 aa7.09□□□□□ -1.27
CTNNA1-217ENST00000519634 IGF2RP11717 2491 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 SMIM28A0A1B0GU29 152 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 CCDC194A0A1B0GVG4 234 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 SLC35F4A4IF30 521 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 FAM221BA6H8Z2 402 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 ACKR2O00590 384 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 TRDMT1O14717 391 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 DCLK1O15075 740 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 CCNT1O60563 726 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 USO1O60763 962 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 BAG4O95429 457 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 CPB1P15086 417 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 DRD1P21728 446 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 GBP1P32455 592 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 RPL9P32969 192 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 ALDH1A3P47895 512 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 MCM2P49736 904 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 RARRES1P49788 294 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 YARSP54577 528 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 PSMA6P60900 246 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 SIM1P81133 766 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 TNK2Q07912 1038 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 SSRP1Q08945 709 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 FBXO43Q4G163 708 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 USP39Q53GS9 565 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 PMS2CLQ68D20 193 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 FSTL4Q6MZW2 842 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 C19orf48Q6RUI8 117 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 Q6ZUG5 572 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 SYT13Q7L8C5 426 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 NEK8Q86SG6 692 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 TMC8Q8IU68 726 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 MCPH1Q8NEM0 835 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 BEST2Q8NFU1 509 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 HAS1Q92839 578 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 BRF1Q92994 677 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 SUSD3Q96L08 255 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 HSD17B14Q9BPX1 270 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 EIF2AK1Q9BQI3 630 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 LRRC3Q9BY71 257 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 OXCT2Q9BYC2 517 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 ATXN3LQ9H3M9 355 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 GOLGA2P5Q9HBQ8 144 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 TIMMDC1Q9NPL8 285 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 TOPORSQ9NS56 1045 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 EVLQ9UI08 416 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 DYRK1BQ9Y463 629 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 ASB3Q9Y575 518 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 NUB1Q9Y5A7 615 aa7.08□□□□□ -1.28
CTNNA1-217ENST00000519634 UPK3BL1B0FP48 263 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 UPK3BL2E5RIL1 263 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 MEFVO15553 781 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 DEXIO95424 95 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 EGFP01133 1207 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 CAPNS1P04632 268 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 XRCC6P12956 609 aaKnown RBP eCLIP7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 RHOQP17081 205 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 MARCKSP29966 332 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 EFNA5P52803 228 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 IRX4P78413 519 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 SOX4Q06945 474 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 RUNX3Q13761 415 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 NPY5RQ15761 445 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 ZNF423Q2M1K9 1284 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 COL28A1Q2UY09 1125 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 XKR4Q5GH76 650 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 STXBP5Q5T5C0 1151 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 GPR158Q5T848 1215 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 ATF7IP2Q5U623 682 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 EEF1DP3Q658K8 133 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 MAEAQ7L5Y9 396 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 FBXL16Q8N461 479 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 CCDC26Q8TAB7 109 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 DEPTORQ8TB45 409 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 SCG3Q8WXD2 468 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 ACDQ96AP0 544 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 MKNK1Q9BUB5 465 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 NUSAP1Q9BXS6 441 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 CCDC113Q9H0I3 377 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 DNAJC25Q9H1X3 360 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 TASP1Q9H6P5 420 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 GPRC5CQ9NQ84 441 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 ZMYM5Q9UJ78 669 aa7.07□□□□□ -1.28
CTNNA1-217ENST00000519634 SMG1Q96Q15 3661 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-217ENST00000519634 A0A1B0GTH6 734 aa7.06□□□□□ -1.28
CTNNA1-217ENST00000519634 SPAARA0A1B0GVQ0 90 aa7.06□□□□□ -1.28
CTNNA1-217ENST00000519634 SERTM1A2A2V5 107 aa7.06□□□□□ -1.28
CTNNA1-217ENST00000519634 PATE3B3GLJ2 98 aa7.06□□□□□ -1.28
CTNNA1-217ENST00000519634 PRAMEF12O95522 483 aa7.06□□□□□ -1.28
CTNNA1-217ENST00000519634 KCNE1P15382 129 aa7.06□□□□□ -1.28
CTNNA1-217ENST00000519634 LIG1P18858 919 aa7.06□□□□□ -1.28
CTNNA1-217ENST00000519634 ATP2B1P20020 1258 aa7.06□□□□□ -1.28
CTNNA1-217ENST00000519634 GABRR2P28476 465 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms