RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ZNF512Q96ME7 567 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 NLRP4Q96MN2 994 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 GPR88Q9GZN0 384 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 UBN1Q9NPG3 1134 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 ZSWIM5Q9P217 1185 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 SUCLA2Q9P2R7 463 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 GIT1Q9Y2X7 761 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 PCDHGB2Q9Y5G2 931 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 ANKHD1Q8IWZ3 2542 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 APCP25054 2843 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 KIAA1549LQ6ZVL6 1849 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 NBEAL1Q6ZS30 2694 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 KCNK3O14649 394 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 FLRT2O43155 660 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 AP5Z1O43299 807 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 FAM87AP0C7U9 286 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 HOXB4P17483 251 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 KIF5BP33176 963 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 GMPRP36959 345 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 BRCC3P46736 316 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 CYP4F8P98187 520 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 PRKCEQ02156 737 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 GRIK3Q13003 919 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 DNAJC3Q13217 504 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 TUSC3Q13454 348 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 CEP55Q53EZ4 464 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 GPR158Q5T848 1215 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 VASH1Q7L8A9 365 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 ZNF589Q86UQ0 364 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 CDR2LQ86X02 465 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 IL17RCQ8NAC3 791 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 ESR2Q92731 530 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 CD101Q93033 1021 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 ZNF419Q96HQ0 510 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 TBC1D32Q96NH3 1257 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 SLC46A2Q9BY10 475 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 CEP131Q9UPN4 1083 aa7.53□□□□□ -1.2
CTNNA1-216ENST00000519489 A1L4Q6 167 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 WIPF3A6NGB9 483 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 FAM86B1E9PN63 330 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 IPO8O15397 1037 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 TSPAN1O60635 241 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 DIAPH2O60879 1101 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 RAB11FIP3O75154 756 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 FAM86B2P0C5J1 330 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 VSIG8P0DPA2 414 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 ELF1P32519 619 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 SREBF1P36956 1147 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 OPRD1P41143 372 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 PCBP4P57723 403 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 BROXQ5VW32 411 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 IQCEQ6IPM2 695 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 RABEPKQ7Z6M1 372 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 ZC3H18Q86VM9 953 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 ITPRIPQ8IWB1 547 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 DHX40Q8IX18 779 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 CCDC116Q8IYX3 515 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 FAM9BQ8IZU0 186 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 LINC00528Q8N1L1 170 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 TXNDC5Q8NBS9 432 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 EXTL1Q92935 676 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 CUL5Q93034 780 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 ECT2Q9H8V3 914 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 FKBPLQ9UIM3 349 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 PLAAQ9Y263 795 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 PCDHB1Q9Y5F3 818 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 HIVEP3Q5T1R4 2406 aa7.52□□□□□ -1.21
CTNNA1-216ENST00000519489 MYO16Q9Y6X6 1858 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 IGLV3-22A0A075B6J6 115 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 TCRBV21S2A2A0A5A6 115 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 RECQL4O94761 1208 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 KLF8O95600 359 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 GABRG2P18507 467 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 WEE1P30291 646 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 MRPL58Q14197 206 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 C1QL3Q5VWW1 255 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 PTRH1Q86Y79 214 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 MMP21Q8N119 569 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 ZCCHC9Q8N567 271 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 LEMD2Q8NC56 503 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 CNNM3Q8NE01 707 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 KCNE4Q8WWG9 221 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 USP13Q92995 863 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 FAM227BQ96M60 508 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 ACAP3Q96P50 834 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 INO80BQ9C086 356 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 ZDHHC5Q9C0B5 715 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 KDM4CQ9H3R0 1056 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 PSTPIP2Q9H939 334 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 CD248Q9HCU0 757 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 CALCOCO1Q9P1Z2 691 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 FBXL5Q9UKA1 691 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 HCN2Q9UL51 889 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 YIPF1Q9Y548 306 aa7.51□□□□□ -1.21
CTNNA1-216ENST00000519489 A0A0D9SFI3 127 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 A0A1B0GVT2 93 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 FAM181BA6NEQ2 426 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 ADAMTS3O15072 1205 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 B4GALT5O43286 388 aa7.5□□□□□ -1.21
CTNNA1-216ENST00000519489 SOAT2O75908 522 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms