RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 STRIP2Q9ULQ0 834 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 PACSIN2Q9UNF0 486 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-209ENST00000519141 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-209ENST00000519141 NME7Q9Y5B8 376 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 TSC2P49815 1807 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 TMEM110-MUSTN1A8MSY1 372 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 CTIFO43310 598 aaKnown RBP13.12□□□□□ -0.31
SPIDR-209ENST00000519141 CXCL10P02778 98 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 PDGFRBP09619 1106 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 PAX3P23760 479 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 MESDQ14696 234 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 PTPROQ16827 1216 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 NOMO2Q5JPE7 1267 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 PHLDB2Q86SQ0 1253 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 TMEM86AQ8N2M4 240 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 WDTC1Q8N5D0 677 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 C12orf29Q8N999 325 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 C3orf58Q8NDZ4 430 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 PAAF1Q9BRP4 392 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 SYNCQ9H7C4 482 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 ABCB6Q9NP58 842 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 FAM49BQ9NUQ9 324 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 PARVAQ9NVD7 372 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 KANSL3Q9P2N6 904 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 ANAPC7Q9UJX3 599 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 TBX21Q9UL17 535 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 STXBP5LQ9Y2K9 1186 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 MICAL3Q7RTP6 2002 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 ENPP3O14638 875 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 B3GAT3O94766 335 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 ODC1P11926 461 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 CXCR5P32302 372 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 CYP2C18P33260 490 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 AARSP49588 968 aaKnown RBP eCLIP13.11□□□□□ -0.31
SPIDR-209ENST00000519141 PTPN20Q4JDL3 420 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 HABP4Q5JVS0 413 aaKnown RBP13.11□□□□□ -0.31
SPIDR-209ENST00000519141 WSCD1Q658N2 575 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 ARHGAP17Q68EM7 881 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 PLEKHA7Q6IQ23 1121 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 LLGL2Q6P1M3 1020 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 DNAJC24Q6P3W2 148 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 ABI1Q8IZP0 508 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 CRYBG2Q8N1P7 616 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 LRRN4CLQ8ND94 238 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 COG1Q8WTW3 980 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 RABGGTAQ92696 567 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 DPEP3Q9H4B8 488 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 TMEM39AQ9NV64 488 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 HESX1Q9UBX0 185 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 PCDHB7Q9Y5E2 793 aa13.11□□□□□ -0.31
SPIDR-209ENST00000519141 TTC3P53804 2025 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 CTAGE15A4D2H0 777 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 MIF4GDA9UHW6 222 aaKnown RBP13.1□□□□□ -0.31
SPIDR-209ENST00000519141 ZNF185O15231 689 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 HCRTO43612 131 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 TADA3O75528 432 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 CLTBP09497 229 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 CTAGE8P0CG41 777 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 SETSIPP0DME0 302 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 LMO2P25791 158 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 GPD2P43304 727 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 RNASELQ05823 741 aaKnown RBP13.1□□□□□ -0.31
SPIDR-209ENST00000519141 PDCLQ13371 301 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 MAMLD1Q13495 774 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 PPP1R26Q5T8A7 1209 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-209ENST00000519141 CCDC181Q5TID7 509 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 DCLRE1AQ6PJP8 1040 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 CTAGE6Q86UF2 777 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 OSTM1Q86WC4 334 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 CTAGE4Q8IX94 777 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 UBA3Q8TBC4 463 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 IPO4Q8TEX9 1081 aaKnown RBP13.1□□□□□ -0.31
SPIDR-209ENST00000519141 UBE2Q2Q8WVN8 375 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 HES6Q96HZ4 224 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-209ENST00000519141 CYTH4Q9UIA0 394 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 ALG6Q9Y672 507 aa13.1□□□□□ -0.31
SPIDR-209ENST00000519141 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 EFCAB8A8MWE9 144 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 MYO1FO00160 1098 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 CES2O00748 559 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 KCNK3O14649 394 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 GABRDO14764 452 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 HOXA2O43364 376 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 SPOPO43791 374 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 IGFBP6P24592 240 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-209ENST00000519141 LHX1P48742 406 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 TAP1Q03518 808 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 DSC1Q08554 894 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 PAN2Q504Q3 1202 aaKnown RBP13.09□□□□□ -0.31
SPIDR-209ENST00000519141 TIGD5Q53EQ6 642 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 CYP4A22Q5TCH4 519 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 DEFB128Q7Z7B8 93 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 METTL23Q86XA0 190 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 B3GALNT2Q8NCR0 500 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 C3orf20Q8ND61 904 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 SPATA18Q8TC71 538 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 C18orf8Q96DM3 657 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms