RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 FAM160A2Q8N612 972 aaPredicted RBP14.74□□□□□ -0.05
VDAC3-204ENST00000519072 KRI1Q8N9T8 703 aaKnown RBP14.74□□□□□ -0.05
VDAC3-204ENST00000519072 ZNF560Q96MR9 790 aa14.74□□□□□ -0.05
VDAC3-204ENST00000519072 KIF9Q9HAQ2 790 aa14.74□□□□□ -0.05
VDAC3-204ENST00000519072 HPS4Q9NQG7 708 aa14.74□□□□□ -0.05
VDAC3-204ENST00000519072 GKN1Q9NS71 199 aa14.74□□□□□ -0.05
VDAC3-204ENST00000519072 ABI2Q9NYB9 513 aaPredicted RBP14.74□□□□□ -0.05
VDAC3-204ENST00000519072 SMC3Q9UQE7 1217 aa14.74□□□□□ -0.05
VDAC3-204ENST00000519072 PCDHB5Q9Y5E4 795 aa14.74□□□□□ -0.05
VDAC3-204ENST00000519072 ANAPC1Q9H1A4 1944 aa14.74□□□□□ -0.05
VDAC3-204ENST00000519072 CEP295Q9C0D2 2601 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 CCDC163A0A0D9SF12 145 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 EXTL3O43909 919 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 PPP1R37O75864 691 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 ADSSP30520 456 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 HOXC13P31276 330 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 PNPLA4P41247 253 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 NLRP12P59046 1061 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 TSPY1Q01534 308 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 RUNX3Q13761 415 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 POSTNQ15063 836 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 SF3A1Q15459 793 aaKnown RBP14.73□□□□□ -0.05
VDAC3-204ENST00000519072 NFE2Q16621 373 aaPredicted RBP14.73□□□□□ -0.05
VDAC3-204ENST00000519072 TMEM196Q5HYL7 178 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 PPM1JQ5JR12 505 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 LARP1BQ659C4 914 aaKnown RBP14.73□□□□□ -0.05
VDAC3-204ENST00000519072 PKN3Q6P5Z2 889 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 SFR1Q86XK3 245 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 MAB21L3Q8N8X9 362 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 POMGNT1Q8WZA1 660 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 USP13Q92995 863 aaPredicted RBP14.73□□□□□ -0.05
VDAC3-204ENST00000519072 STRA6Q9BX79 667 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 IKZF4Q9H2S9 585 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 CCL26Q9Y258 94 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 MYO16Q9Y6X6 1858 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 KIAA1549LQ6ZVL6 1849 aa14.73□□□□□ -0.05
VDAC3-204ENST00000519072 TRDMT1O14717 391 aaKnown RBP14.72□□□□□ -0.05
VDAC3-204ENST00000519072 GDF9O60383 454 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 ATG13O75143 517 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 CSH1P0DML2 217 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 CSH2P0DML3 217 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 GRSF1Q12849 480 aaKnown RBP eCLIP14.72□□□□□ -0.05
VDAC3-204ENST00000519072 BFSP1Q12934 665 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 ZNF268Q14587 947 aaPredicted RBP14.72□□□□□ -0.05
VDAC3-204ENST00000519072 FSTL4Q6MZW2 842 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 MON1AQ86VX9 555 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 LEO1Q8WVC0 666 aaPredicted RBP14.72□□□□□ -0.05
VDAC3-204ENST00000519072 GAB3Q8WWW8 586 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 MRPS31Q92665 395 aaKnown RBP14.72□□□□□ -0.05
VDAC3-204ENST00000519072 CHFRQ96EP1 664 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 LOXL4Q96JB6 756 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 EBF3Q9H4W6 596 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 TDP1Q9NUW8 608 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 TMLHEQ9NVH6 421 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 SEL1LQ9UBV2 794 aa14.72□□□□□ -0.05
VDAC3-204ENST00000519072 HELZP42694 1942 aaKnown RBP14.71□□□□□ -0.05
VDAC3-204ENST00000519072 OTOL1A6NHN0 477 aaPredicted RBP14.71□□□□□ -0.05
VDAC3-204ENST00000519072 PRPF40AO75400 957 aaKnown RBP14.71□□□□□ -0.05
VDAC3-204ENST00000519072 VASPP50552 380 aaPredicted RBP14.71□□□□□ -0.05
VDAC3-204ENST00000519072 AMPD2Q01433 879 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 TXNDC8Q6A555 127 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 TRIM68Q6AZZ1 485 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 DYMQ7RTS9 669 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 CACNA2D4Q7Z3S7 1137 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 BRSK2Q8IWQ3 736 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 EPSTI1Q96J88 318 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 ACBD6Q9BR61 282 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 PI4K2AQ9BTU6 479 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 ABCB6Q9NP58 842 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 STK17AQ9UEE5 414 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 L1RE1Q9UN81 338 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 SLC8A2Q9UPR5 921 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 EXOC7Q9UPT5 735 aa14.71□□□□□ -0.05
VDAC3-204ENST00000519072 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.71□□□□□ -0.05
VDAC3-204ENST00000519072 CHD6Q8TD26 2715 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 RPP40O75818 363 aaKnown RBP14.7□□□□□ -0.06
VDAC3-204ENST00000519072 AKAP3O75969 853 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 NOL4O94818 638 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 EPN2O95208 641 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 ITGB3P05106 788 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 GAP43P17677 238 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 POLR2BP30876 1174 aaKnown RBP14.7□□□□□ -0.06
VDAC3-204ENST00000519072 RAP1GAPP47736 663 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 GPR15P49685 360 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 LIMK1P53667 647 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 WNT7BP56706 349 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 TFAMQ00059 246 aaKnown RBP14.7□□□□□ -0.06
VDAC3-204ENST00000519072 KCNA1Q09470 495 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 PDGFRLQ15198 375 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 INTS6LQ5JSJ4 861 aaKnown RBP14.7□□□□□ -0.06
VDAC3-204ENST00000519072 CC2D1AQ6P1N0 951 aaPredicted RBP14.7□□□□□ -0.06
VDAC3-204ENST00000519072 USP49Q70CQ1 688 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 TMEM86AQ8N2M4 240 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 PDCL2Q8N4E4 241 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 C1orf127Q8N9H9 656 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 RIN3Q8TB24 985 aa14.7□□□□□ -0.06
VDAC3-204ENST00000519072 CACTINQ8WUQ7 758 aaKnown RBP14.7□□□□□ -0.06
VDAC3-204ENST00000519072 DDX1Q92499 740 aaKnown RBP14.7□□□□□ -0.06
VDAC3-204ENST00000519072 TRMT2BQ96GJ1 504 aaKnown RBP14.7□□□□□ -0.06
VDAC3-204ENST00000519072 ACCSQ96QU6 501 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms