RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 MLST8Q9BVC4 326 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 NAA15Q9BXJ9 866 aaKnown RBP4.54□□□□□ -1.68
VPS13B-207ENST00000518569 SERHL2Q9H4I8 314 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 MMRN2Q9H8L6 949 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 SACM1LQ9NTJ5 587 aa4.54□□□□□ -1.68
VPS13B-207ENST00000518569 A0A0B4J269 797 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 UNC119BA6NIH7 251 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 DCLK1O15075 740 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 FZD7O75084 574 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 ZKSCAN1P17029 563 aaPredicted RBP4.53□□□□□ -1.68
VPS13B-207ENST00000518569 GATA3P23771 443 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 KLRC1P26715 233 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 LRPAP1P30533 357 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 TM4SF4P48230 202 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 CASP5P51878 434 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 HMGA2P52926 109 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 MC2RQ01718 297 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 TUBB3Q13509 450 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 HDAC1Q13547 482 aaPredicted RBP4.53□□□□□ -1.68
VPS13B-207ENST00000518569 CD300EQ496F6 205 aaPredicted RBP4.53□□□□□ -1.68
VPS13B-207ENST00000518569 PREPLQ4J6C6 727 aaPredicted RBP4.53□□□□□ -1.68
VPS13B-207ENST00000518569 LAYNQ6UX15 382 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 FAM109AQ8N4B1 249 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 TMEM125Q96AQ2 219 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 COQ10AQ96MF6 247 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 APOL5Q9BWW9 433 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 KRTAP17-1Q9BYP8 105 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 WDR11Q9BZH6 1224 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 SCAND2PQ9GZW5 306 aaPredicted RBP4.53□□□□□ -1.68
VPS13B-207ENST00000518569 SMOC2Q9H3U7 446 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 XPNPEP3Q9NQH7 507 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 ZSCAN32Q9NX65 697 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 ANKFY1Q9P2R3 1169 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 SHOC2Q9UQ13 582 aa4.53□□□□□ -1.68
VPS13B-207ENST00000518569 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.53□□□□□ -1.68
VPS13B-207ENST00000518569 F5H697 171 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 PYCARD-AS1I3L0S3 204 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 PROM1O43490 865 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 IL18RAPO95256 599 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 ADH4P08319 380 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 TGM1P22735 817 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 PPIFP30405 207 aaKnown RBP4.52□□□□□ -1.69
VPS13B-207ENST00000518569 ZEB1P37275 1124 aaPredicted RBP4.52□□□□□ -1.69
VPS13B-207ENST00000518569 PIK3CBP42338 1070 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 PXNP49023 591 aaPredicted RBP4.52□□□□□ -1.69
VPS13B-207ENST00000518569 AK2P54819 239 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 ABHD18Q0P651 414 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 DAG1Q14118 895 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 C3orf38Q5JPI3 329 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 USP51Q70EK9 711 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 DPP9Q86TI2 863 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 MPP5Q8N3R9 675 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 SDR16C5Q8N3Y7 309 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 AMER2Q8N7J2 671 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 ASB10Q8WXI3 467 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 SPSB4Q96A44 273 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 PTCD3Q96EY7 689 aaKnown RBP4.52□□□□□ -1.69
VPS13B-207ENST00000518569 PRRX2Q99811 253 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 PTDSS2Q9BVG9 487 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 COLEC11Q9BWP8 271 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 BRIP1Q9BX63 1249 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 TTYH3Q9C0H2 523 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 MS4A7Q9GZW8 240 aaPredicted RBP4.52□□□□□ -1.69
VPS13B-207ENST00000518569 PNPLA8Q9NP80 782 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 SERHLQ9NQF3 203 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 PADI4Q9UM07 663 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 DMTF1Q9Y222 760 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 SNX13Q9Y5W8 968 aa4.52□□□□□ -1.69
VPS13B-207ENST00000518569 COL4A3Q01955 1670 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 CCP110O43303 1012 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 HKR1P10072 659 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 TXNP10599 105 aaKnown RBP4.51□□□□□ -1.69
VPS13B-207ENST00000518569 ITGAMP11215 1152 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 CHRM3P20309 590 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 CD6P30203 668 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 AVPR1BP47901 424 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 ALDH5A1P51649 535 aaPredicted RBP4.51□□□□□ -1.69
VPS13B-207ENST00000518569 ZNF134P52741 427 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 NXPH1P58417 271 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 RPS16P62249 146 aaKnown RBP4.51□□□□□ -1.69
VPS13B-207ENST00000518569 ITIH3Q06033 890 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 ZNF543Q08ER8 600 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 UBE4AQ14139 1066 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 MGAT5BQ3V5L5 792 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 DCAF12L1Q5VU92 463 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 ICE2Q659A1 982 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 IGFL4Q6B9Z1 124 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 IL31Q6EBC2 164 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 VWA1Q6PCB0 445 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 TMEM108Q6UXF1 575 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 Q8N1X5 172 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 LCORLQ8N3X6 602 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 OR56A3Q8NH54 315 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 SSH3Q8TE77 659 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 IPCEF1Q8WWN9 437 aaPredicted RBP4.51□□□□□ -1.69
VPS13B-207ENST00000518569 LINC00476Q8WZB0 136 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 SORCS2Q96PQ0 1159 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 TBCBQ99426 244 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 AMBRA1Q9C0C7 1298 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 DHX36Q9H2U1 1008 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms