RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 L1RE1Q9UN81 338 aa21.29■■□□□ 1
TRIO-223ENST00000515710 TMEM191CA6NGB0 347 aa21.29■■□□□ 1
TRIO-223ENST00000515710 EOMESO95936 686 aa21.29■■□□□ 1
TRIO-223ENST00000515710 MTFR1Q15390 333 aa21.29■■□□□ 1
TRIO-223ENST00000515710 FBXO38Q6PIJ6 1188 aa21.29■■□□□ 1
TRIO-223ENST00000515710 LRRC8DQ7L1W4 858 aa21.29■■□□□ 1
TRIO-223ENST00000515710 ZNF598Q86UK7 904 aaKnown RBP21.29■■□□□ 1
TRIO-223ENST00000515710 PDCL2Q8N4E4 241 aa21.29■■□□□ 1
TRIO-223ENST00000515710 RNF208Q9H0X6 261 aa21.29■■□□□ 1
TRIO-223ENST00000515710 RBM12Q9NTZ6 932 aaKnown RBP21.29■■□□□ 1
TRIO-223ENST00000515710 RAB21Q9UL25 225 aa21.29■■□□□ 1
TRIO-223ENST00000515710 NME7Q9Y5B8 376 aa21.29■■□□□ 1
TRIO-223ENST00000515710 PODXLO00592 558 aa21.28■■□□□ 1
TRIO-223ENST00000515710 CYB561D2O14569 222 aa21.28■■□□□ 1
TRIO-223ENST00000515710 SETSIPP0DME0 302 aa21.28■■□□□ 1
TRIO-223ENST00000515710 PAX3P23760 479 aa21.28■■□□□ 1
TRIO-223ENST00000515710 RNASE9P60153 205 aaKnown RBP21.28■■□□□ 1
TRIO-223ENST00000515710 MBTPS1Q14703 1052 aa21.28■■□□□ 1
TRIO-223ENST00000515710 GLE1Q53GS7 698 aaKnown RBP21.28■■□□□ 1
TRIO-223ENST00000515710 PPP1R15BQ5SWA1 713 aa21.28■■□□□ 1
TRIO-223ENST00000515710 ADGRF2Q8IZF7 708 aa21.28■■□□□ 1
TRIO-223ENST00000515710 C12orf29Q8N999 325 aa21.28■■□□□ 1
TRIO-223ENST00000515710 RNF169Q8NCN4 708 aa21.28■■□□□ 1
TRIO-223ENST00000515710 ALG3Q92685 438 aa21.28■■□□□ 1
TRIO-223ENST00000515710 KRT35Q92764 455 aa21.28■■□□□ 1
TRIO-223ENST00000515710 DDX27Q96GQ7 796 aaKnown RBP21.28■■□□□ 1
TRIO-223ENST00000515710 FTHL17Q9BXU8 183 aa21.28■■□□□ 1
TRIO-223ENST00000515710 TRIM7Q9C029 511 aa21.28■■□□□ 1
TRIO-223ENST00000515710 INPPL1O15357 1258 aa21.27■■□□□ 1
TRIO-223ENST00000515710 FGFR1P11362 822 aa21.27■■□□□ 1
TRIO-223ENST00000515710 MCM3P25205 808 aa21.27■■□□□ 1
TRIO-223ENST00000515710 AFF1P51825 1210 aaKnown RBP21.27■■□□□ 1
TRIO-223ENST00000515710 RWDD2BP57060 319 aa21.27■■□□□ 1
TRIO-223ENST00000515710 GRIK3Q13003 919 aa21.27■■□□□ 1
TRIO-223ENST00000515710 BRD3Q15059 726 aa21.27■■□□□ 1
TRIO-223ENST00000515710 GOLGA7BQ2TAP0 167 aa21.27■■□□□ 1
TRIO-223ENST00000515710 PPP1R26Q5T8A7 1209 aaPredicted RBP21.27■■□□□ 1
TRIO-223ENST00000515710 DCAF12L1Q5VU92 463 aa21.27■■□□□ 1
TRIO-223ENST00000515710 DCUN1D2Q6PH85 259 aa21.27■■□□□ 1
TRIO-223ENST00000515710 SLC24A5Q71RS6 500 aa21.27■■□□□ 1
TRIO-223ENST00000515710 UBA3Q8TBC4 463 aa21.27■■□□□ 1
TRIO-223ENST00000515710 TNIP3Q96KP6 325 aa21.27■■□□□ 1
TRIO-223ENST00000515710 CPXM1Q96SM3 734 aa21.27■■□□□ 1
TRIO-223ENST00000515710 SYNCQ9H7C4 482 aa21.27■■□□□ 1
TRIO-223ENST00000515710 HESX1Q9UBX0 185 aa21.27■■□□□ 1
TRIO-223ENST00000515710 SIGLEC16A6NMB1 481 aa21.27■■□□□ 1
TRIO-223ENST00000515710 C9IYK1 514 aa21.27■■□□□ 1
TRIO-223ENST00000515710 CCDC188H7C350 402 aa21.27■■□□□ 1
TRIO-223ENST00000515710 FAM189BP81408 668 aa21.27■■□□□ 1
TRIO-223ENST00000515710 PDCLQ13371 301 aa21.27■■□□□ 1
TRIO-223ENST00000515710 RTN4RL1Q86UN2 441 aaPredicted RBP21.27■■□□□ 1
TRIO-223ENST00000515710 IPO4Q8TEX9 1081 aaKnown RBP21.27■■□□□ 1
TRIO-223ENST00000515710 RNPC3Q96LT9 517 aaKnown RBP21.27■■□□□ 1
TRIO-223ENST00000515710 UROC1Q96N76 676 aa21.27■■□□□ 1
TRIO-223ENST00000515710 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.27■■□□□ 1
TRIO-223ENST00000515710 CAPN15O75808 1086 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 CLCNKBP51801 687 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 PSMC1P62191 440 aaKnown RBP21.26■□□□□ 0.99
TRIO-223ENST00000515710 PKDCCQ504Y2 493 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 CYP4A22Q5TCH4 519 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 SEL1L2Q5TEA6 688 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 WDR93Q6P2C0 686 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 XYLT1Q86Y38 959 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 TMEM86AQ8N2M4 240 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 RUBCNQ92622 972 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 SENP8Q96LD8 212 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 PLVAPQ9BX97 442 aa21.26■□□□□ 0.99
TRIO-223ENST00000515710 PDGFRBP09619 1106 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 LMO2P25791 158 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 SNX16P57768 344 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 RPL7AP62424 266 aaKnown RBP21.25■□□□□ 0.99
TRIO-223ENST00000515710 UPP1Q16831 310 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 LONRF2Q1L5Z9 754 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 CPNE8Q86YQ8 564 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 STK32AQ8WU08 396 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 MCEEQ96PE7 176 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 PNKPQ96T60 521 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 DPEP3Q9H4B8 488 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 CCDC151A5D8V7 595 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 KRIT1O00522 736 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 GABRDO14764 452 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 POMCP01189 267 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 FGGP02679 453 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 ERBB2P04626 1255 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 PFKMP08237 780 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 KRT3P12035 628 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 TUSC3Q13454 348 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 PIGHQ14442 188 aaPredicted RBP21.25■□□□□ 0.99
TRIO-223ENST00000515710 DSTYKQ6XUX3 929 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 MCRS1Q96EZ8 462 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 LRRC1Q9BTT6 524 aa21.25■□□□□ 0.99
TRIO-223ENST00000515710 PITPNM1O00562 1244 aa21.24■□□□□ 0.99
TRIO-223ENST00000515710 PSTPIP1O43586 416 aa21.24■□□□□ 0.99
TRIO-223ENST00000515710 GJB6O95452 261 aa21.24■□□□□ 0.99
TRIO-223ENST00000515710 MYCP01106 439 aaPredicted RBP21.24■□□□□ 0.99
TRIO-223ENST00000515710 HSPA6P17066 643 aa21.24■□□□□ 0.99
TRIO-223ENST00000515710 LHX1P48742 406 aa21.24■□□□□ 0.99
TRIO-223ENST00000515710 MARCKSL1P49006 195 aa21.24■□□□□ 0.99
TRIO-223ENST00000515710 AARSP49588 968 aaKnown RBP eCLIP21.24■□□□□ 0.99
TRIO-223ENST00000515710 ZNF211Q13398 564 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms