RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 TINAGL1Q9GZM7 467 aaPredicted RBP5.05□□□□□ -1.6
LINC01088-211ENST00000515597 SIK2Q9H0K1 926 aa5.05□□□□□ -1.6
LINC01088-211ENST00000515597 LMBRD1Q9NUN5 540 aa5.05□□□□□ -1.6
LINC01088-211ENST00000515597 SH3BP4Q9P0V3 963 aa5.05□□□□□ -1.6
LINC01088-211ENST00000515597 ANKRD62A6NC57 917 aa5.04□□□□□ -1.6
LINC01088-211ENST00000515597 LATS1O95835 1130 aa5.04□□□□□ -1.6
LINC01088-211ENST00000515597 JUPP14923 745 aa5.04□□□□□ -1.6
LINC01088-211ENST00000515597 TOB1P50616 345 aaPredicted RBP5.04□□□□□ -1.6
LINC01088-211ENST00000515597 PROSER3Q2NL68 480 aa5.04□□□□□ -1.6
LINC01088-211ENST00000515597 VPS53Q5VIR6 699 aa5.04□□□□□ -1.6
LINC01088-211ENST00000515597 C11orf87Q6NUJ2 197 aa5.04□□□□□ -1.6
LINC01088-211ENST00000515597 YTHDF3Q7Z739 585 aaKnown RBP5.04□□□□□ -1.6
LINC01088-211ENST00000515597 KLHDC4Q8TBB5 520 aa5.04□□□□□ -1.6
LINC01088-211ENST00000515597 DDX17Q92841 729 aaKnown RBP5.04□□□□□ -1.6
LINC01088-211ENST00000515597 SH2D3AQ9BRG2 576 aa5.04□□□□□ -1.6
LINC01088-211ENST00000515597 SERHLQ9NQF3 203 aa5.04□□□□□ -1.6
LINC01088-211ENST00000515597 PNPOQ9NVS9 261 aa5.04□□□□□ -1.6
LINC01088-211ENST00000515597 SMIM22K7EJ46 135 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 KIF20AO95235 890 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 NDUFB7P17568 137 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 ITGALP20701 1170 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 CD6P30203 668 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 NKX6-1P78426 367 aaPredicted RBP5.03□□□□□ -1.6
LINC01088-211ENST00000515597 BMPR2Q13873 1038 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 SUPT20HL1Q3ZLR7 823 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 PLAC9Q5JTB6 97 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 ZNF551Q7Z340 670 aaPredicted RBP5.03□□□□□ -1.6
LINC01088-211ENST00000515597 NEK8Q86SG6 692 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 PPP1R3BQ86XI6 285 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 FAM109AQ8N4B1 249 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 TNPO1Q92973 898 aaKnown RBP5.03□□□□□ -1.6
LINC01088-211ENST00000515597 RPL36ALQ969Q0 106 aaKnown RBP5.03□□□□□ -1.6
LINC01088-211ENST00000515597 FAM136AQ96C01 138 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 REPS1Q96D71 796 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 MVB12AQ96EY5 273 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 ZNF48Q96MX3 618 aaPredicted RBP5.03□□□□□ -1.6
LINC01088-211ENST00000515597 QTRT1Q9BXR0 403 aaKnown RBP5.03□□□□□ -1.6
LINC01088-211ENST00000515597 NRIP3Q9NQ35 241 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 SERTAD4Q9NUC0 356 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 ANKRD6Q9Y2G4 727 aa5.03□□□□□ -1.6
LINC01088-211ENST00000515597 TISP43B9A030 160 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 ZNF213O14771 459 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 ABLIM3O94929 683 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 GNAI2P04899 355 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 PTGER1P34995 402 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 TUBA4AP68366 448 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 SLC44A4Q53GD3 710 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 ATAT1Q5SQI0 421 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 EMC10Q5UCC4 262 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 CEP85Q6P2H3 762 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 USP37Q86T82 979 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 HPS3Q969F9 1004 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 HOOK2Q96ED9 719 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 FCRL4Q96PJ5 515 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 ARHGEF3Q9NR81 526 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.02□□□□□ -1.61
LINC01088-211ENST00000515597 BTBD3Q9Y2F9 522 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 ABCC9O60706 1549 aa5.02□□□□□ -1.61
LINC01088-211ENST00000515597 SHROOM4Q9ULL8 1493 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 ZNF521Q96K83 1311 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 IKBKBO14920 756 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 ALDH1L1O75891 902 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 BMP15O95972 392 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 AHSGP02765 367 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 CYP2D6P10635 497 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 PLS1Q14651 629 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 CEP78Q5JTW2 689 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 MORN5Q5VZ52 161 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 SLC2A7Q6PXP3 512 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 SLC29A4Q7RTT9 530 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 BRIX1Q8TDN6 353 aaKnown RBP5.01□□□□□ -1.61
LINC01088-211ENST00000515597 ATRIPQ8WXE1 791 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 SEMA4CQ9C0C4 833 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 AASDHPPTQ9NRN7 309 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 IP6K2Q9UHH9 426 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 PCDHA1Q9Y5I3 950 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 RAD54BQ9Y620 910 aa5.01□□□□□ -1.61
LINC01088-211ENST00000515597 hCG_2014768A0A024R1R8 64 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 H0YIZ8 118 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 M0QYG6 137 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 PPM1DO15297 605 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 JTBO76095 146 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 NXPH3O95157 252 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 PF4V1P10720 104 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 GCLCP48506 637 aaPredicted RBP5□□□□□ -1.61
LINC01088-211ENST00000515597 CLCN2P51788 898 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 MCL1Q07820 350 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 BOP1Q14137 746 aaKnown RBP5□□□□□ -1.61
LINC01088-211ENST00000515597 PRAMEF17Q5VTA0 474 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 FAM160B1Q5W0V3 765 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 SLC18B1Q6NT16 456 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 MAVSQ7Z434 540 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 FANCBQ8NB91 859 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 STAG1Q8WVM7 1258 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 SLC35A4Q96G79 324 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 CDK5RAP3Q96JB5 506 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 MAP3K14Q99558 947 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 RHOBTB2Q9BYZ6 727 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms