RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 GINS2Q9Y248 185 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNF8-214ENST00000515174 NOC2LQ9Y3T9 749 aaKnown RBP10.82□□□□□ -0.68
SNF8-214ENST00000515174 CDY2AQ9Y6F7 541 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 TRIP11Q15643 1979 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 GRIN2DO15399 1336 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 MOXD2PA6NHM9 499 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 O00370 1275 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 KRIT1O00522 736 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 FSCN2O14926 492 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 SART1O43290 800 aaKnown RBP10.81□□□□□ -0.68
SNF8-214ENST00000515174 SPOPO43791 374 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 RPS6KA5O75582 802 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 CALCAP01258 141 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 CHRNA1P02708 482 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 BRD2P25440 801 aaKnown RBP10.81□□□□□ -0.68
SNF8-214ENST00000515174 GPD2P43304 727 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 RAB27AP51159 221 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 CDH8P55286 799 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 PIGHQ14442 188 aaPredicted RBP10.81□□□□□ -0.68
SNF8-214ENST00000515174 SGO2Q562F6 1265 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 ARHGAP17Q68EM7 881 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 EMBQ6PCB8 327 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 MMS22LQ6ZRQ5 1243 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 SLC43A3Q8NBI5 491 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 ZNF560Q96MR9 790 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 C11orf70Q9BRQ4 267 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 UBXN6Q9BZV1 441 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 NXF3Q9H4D5 531 aaKnown RBP10.81□□□□□ -0.68
SNF8-214ENST00000515174 SMYD3Q9H7B4 428 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 CYLDQ9NQC7 956 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 SLC38A7Q9NVC3 462 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 EHD2Q9NZN4 543 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 ST3GAL5Q9UNP4 418 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 GIT1Q9Y2X7 761 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 IPPQ9Y573 584 aa10.81□□□□□ -0.68
SNF8-214ENST00000515174 GOLGA6L10A0A0M3HER8 536 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 A0A1W2PQ45 241 aaPredicted RBP10.8□□□□□ -0.68
SNF8-214ENST00000515174 A0A1W2PQY0 241 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 FAM187AA6NFU0 413 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 ATMINO43313 823 aaPredicted RBP10.8□□□□□ -0.68
SNF8-214ENST00000515174 FGGP02679 453 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 SKIP12755 728 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 NDST1P52848 882 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 ACLYP53396 1101 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 SNX16P57768 344 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 DHX34Q14147 1143 aaKnown RBP10.8□□□□□ -0.68
SNF8-214ENST00000515174 DSC3Q14574 896 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 TRIM71Q2Q1W2 868 aaKnown RBP10.8□□□□□ -0.68
SNF8-214ENST00000515174 PKDCCQ504Y2 493 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 FAM47CQ5HY64 1035 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 FBXO47Q5MNV8 452 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 SEL1L2Q5TEA6 688 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 DENND1BQ6P3S1 775 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 RHOT1Q8IXI2 618 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 KATNAL2Q8IYT4 538 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 TOP6BLQ8N6T0 577 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 C12orf50Q8NA57 414 aaPredicted RBP10.8□□□□□ -0.68
SNF8-214ENST00000515174 MAFAQ8NHW3 353 aaPredicted RBP10.8□□□□□ -0.68
SNF8-214ENST00000515174 SPATA18Q8TC71 538 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 AENQ8WTP8 325 aaKnown RBP10.8□□□□□ -0.68
SNF8-214ENST00000515174 KRT35Q92764 455 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 CAVIN3Q969G5 261 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 C18orf8Q96DM3 657 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 MCRS1Q96EZ8 462 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
SNF8-214ENST00000515174 PKNOX2Q96KN3 472 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 PPP1R10Q96QC0 940 aaKnown RBP10.8□□□□□ -0.68
SNF8-214ENST00000515174 TWNKQ96RR1 684 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 KRT12Q99456 494 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 ERVK-5Q9HDB9 667 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 HOMER3Q9NSC5 361 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 SMARCAL1Q9NZC9 954 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 PCYOX1Q9UHG3 505 aa10.8□□□□□ -0.68
SNF8-214ENST00000515174 KPNA7A9QM74 516 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 KBTBD13C9JR72 458 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 INPPL1O15357 1258 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 MICAL2O94851 1124 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 PYGMP11217 842 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 CD19P15391 556 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 CHRNA3P32297 505 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 RPL9P32969 192 aaKnown RBP10.79□□□□□ -0.68
SNF8-214ENST00000515174 SCNN1AP37088 669 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 RPL34P49207 117 aaKnown RBP10.79□□□□□ -0.68
SNF8-214ENST00000515174 TAF6P49848 677 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 ATN1P54259 1190 aaPredicted RBP10.79□□□□□ -0.68
SNF8-214ENST00000515174 EPHB4P54760 987 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 COPS2P61201 443 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 CUL1Q13616 776 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 ITGA7Q13683 1181 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 PTGISQ16647 500 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 SV2CQ496J9 727 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 ZNF394Q53GI3 561 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 TWF2Q6IBS0 349 aaKnown RBP10.79□□□□□ -0.68
SNF8-214ENST00000515174 DNAJC24Q6P3W2 148 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 SCARA5Q6ZMJ2 495 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 ARCQ7LC44 396 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 POLNQ7Z5Q5 900 aa10.79□□□□□ -0.68
SNF8-214ENST00000515174 SLC13A5Q86YT5 568 aaPredicted RBP10.79□□□□□ -0.68
SNF8-214ENST00000515174 PASD1Q8IV76 773 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms