RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ITGB1BP2Q9UKP3 347 aa13.74□□□□□ -0.21
TCOF1-213ENST00000514442 EME2A4GXA9 379 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-213ENST00000514442 PMS1P54277 932 aaKnown RBP13.73□□□□□ -0.21
TCOF1-213ENST00000514442 IER5Q5VY09 327 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 ARMC3Q5W041 872 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 APPL2Q8NEU8 664 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 GCNAQ96QF7 691 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 MKNK1Q9BUB5 465 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 DDX56Q9NY93 547 aaKnown RBP13.73□□□□□ -0.21
TCOF1-213ENST00000514442 ANGPTL3Q9Y5C1 460 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 A0A087X0T9 212 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 FAM228BP0C875 321 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 KITP10721 976 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 HOXA10P31260 410 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-213ENST00000514442 EPHX2P34913 555 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 SLC12A1Q13621 1099 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 C4orf33Q8N1A6 199 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 CERS5Q8N5B7 392 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 ZNF184Q99676 751 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-213ENST00000514442 VEGFAP15692 232 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-213ENST00000514442 PMLP29590 882 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 ARSEP51690 589 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 KYAT1Q16773 422 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.73□□□□□ -0.212e-7■■■■■ 102.3
TCOF1-213ENST00000514442 DDI1Q8WTU0 396 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 FSD1LQ9BXM9 530 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 PACSIN1Q9BY11 444 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 ADAM33Q9BZ11 813 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 ZNF212Q9UDV6 495 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 FAM86B1E9PN63 330 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 ESRRBO95718 433 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 FAM86B2P0C5J1 330 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 RAB44Q7Z6P3 723 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-213ENST00000514442 TTC39CQ8N584 583 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 PPM1NQ8N819 430 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 TNIP3Q96KP6 325 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 NUDT12Q9BQG2 462 aa13.73□□□□□ -0.21
TCOF1-213ENST00000514442 GOLGA8CPA6NN73 597 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 H3BRJ5 948 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 PDGFRAP16234 1089 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 GTF2H1P32780 548 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 SERPINB8P50452 374 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 ORC1Q13415 861 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 DGKDQ16760 1214 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 ERO1BQ86YB8 467 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 UBA3Q8TBC4 463 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 FBXO25Q8TCJ0 367 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 POP1Q99575 1024 aaKnown RBP13.72□□□□□ -0.21
TCOF1-213ENST00000514442 PDCD2LQ9BRP1 358 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 TMCO1Q9UM00 188 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 LZTS1Q9Y250 596 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 FANCGO15287 622 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 OCA2Q04671 838 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 CYTH1Q15438 398 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 MDH1BQ5I0G3 518 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 GNASQ5JWF2 1037 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 SCFD1Q8WVM8 642 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 CASP10Q92851 521 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 NRBF2Q96F24 287 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 FAM96AQ9H5X1 160 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 METTL5Q9NRN9 209 aaKnown RBP13.72□□□□□ -0.21
TCOF1-213ENST00000514442 CFLARO15519 480 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 NPTX2P47972 431 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 BTKQ06187 659 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 C2CD6Q53TS8 623 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 GLRA4Q5JXX5 417 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 RNF220Q5VTB9 566 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 RNF43Q68DV7 783 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 KRT37O76014 449 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 COMTP21964 271 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 PON1P27169 355 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 SULT1E1P49888 294 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 RHBDL3P58872 404 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 BTBD8Q5XKL5 378 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 JADE1Q6IE81 842 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 GPAT2Q6NUI2 795 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 SH3RF1Q7Z6J0 888 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 FAM83AQ86UY5 434 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 CYP4F11Q9HBI6 524 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 AGO4Q9HCK5 861 aaKnown RBP13.72□□□□□ -0.21
TCOF1-213ENST00000514442 PALMDQ9NP74 551 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 PRMT7Q9NVM4 692 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-213ENST00000514442 FAM198AQ9UFP1 575 aa13.72□□□□□ -0.21
TCOF1-213ENST00000514442 DISP2A7MBM2 1401 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 TMEM150BA6NC51 233 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 SUPT20HL2P0C7V6 817 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 SP100P23497 879 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-213ENST00000514442 MLH1P40692 756 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 LAMC2Q13753 1193 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 CNGA2Q16280 664 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 LVRNQ6Q4G3 990 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 RDM1Q8NG50 284 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 CCDC124Q96CT7 223 aaKnown RBP13.71□□□□□ -0.21
TCOF1-213ENST00000514442 SENP7Q9BQF6 1050 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 ALG13Q9NP73 1137 aaKnown RBP13.71□□□□□ -0.21
TCOF1-213ENST00000514442 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-213ENST00000514442 KLK14Q9P0G3 267 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 UVRAGQ9P2Y5 699 aa13.71□□□□□ -0.21
TCOF1-213ENST00000514442 SATB2Q9UPW6 733 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms