RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 LINC01599Q8WXQ3 324 aa13.6□□□□□ -0.23
PVT1-203ENST00000513868 LRRC1Q9BTT6 524 aa13.6□□□□□ -0.23
PVT1-203ENST00000513868 BEGAINQ9BUH8 593 aa13.6□□□□□ -0.23
PVT1-203ENST00000513868 RSAD1Q9HA92 442 aa13.6□□□□□ -0.23
PVT1-203ENST00000513868 RGS18Q9NS28 235 aa13.6□□□□□ -0.23
PVT1-203ENST00000513868 WBP1LQ9NX94 342 aa13.6□□□□□ -0.23
PVT1-203ENST00000513868 CCDC66A2RUB6 948 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 C9IYK1 514 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 PGRMC1O00264 195 aaKnown RBP13.59□□□□□ -0.23
PVT1-203ENST00000513868 SPOPO43791 374 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 ERBB2P04626 1255 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 CCL5P13501 91 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 GNL1P36915 607 aaPredicted RBP13.59□□□□□ -0.23
PVT1-203ENST00000513868 SLC1A1P43005 524 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 OGDHQ02218 1023 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 PDCLQ13371 301 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 ZNF211Q13398 564 aaPredicted RBP13.59□□□□□ -0.23
PVT1-203ENST00000513868 DAB2IPQ5VWQ8 1189 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 ARHGAP17Q68EM7 881 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 AADACL2Q6P093 401 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 OSTM1Q86WC4 334 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 TTC30AQ86WT1 665 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 XYLT1Q86Y38 959 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 PDCL2Q8N4E4 241 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 TOP6BLQ8N6T0 577 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 C18orf8Q96DM3 657 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 RNPC3Q96LT9 517 aaKnown RBP13.59□□□□□ -0.23
PVT1-203ENST00000513868 PAAF1Q9BRP4 392 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 SEZ6LQ9BYH1 1024 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
PVT1-203ENST00000513868 PTPRDP23468 1912 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 TARSL2A2RTX5 802 aaKnown RBP13.59□□□□□ -0.23
PVT1-203ENST00000513868 A8MXQ7 604 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 INPPL1O15357 1258 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 PDGFRBP09619 1106 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 FAM163BP0C2L3 166 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 PYGMP11217 842 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 SKIP12755 728 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 SELPP16109 830 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 WARSP23381 471 aaKnown RBP13.59□□□□□ -0.23
PVT1-203ENST00000513868 TTC3P53804 2025 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 FAM189BP81408 668 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 STILQ15468 1287 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 UPP1Q16831 310 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 GOLGA7BQ2TAP0 167 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 WDR93Q6P2C0 686 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 LRRC8DQ7L1W4 858 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 ADGRF2Q8IZF7 708 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 UBL4BQ8N7F7 174 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 RNF169Q8NCN4 708 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 HDAC7Q8WUI4 952 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 PGBD4Q96DM1 585 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 FAM49BQ9NUQ9 324 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 STRIP2Q9ULQ0 834 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
PVT1-203ENST00000513868 NLRC5Q86WI3 1866 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 SIGLEC16A6NMB1 481 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 TULP2O00295 520 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 PODXLO00592 558 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 CYB561D2O14569 222 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 GABRDO14764 452 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 HUS1O60921 280 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 NBNO60934 754 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 GABBR2O75899 941 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 FGGP02679 453 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 RPL9P32969 192 aaKnown RBP13.58□□□□□ -0.24
PVT1-203ENST00000513868 MAN1A1P33908 653 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 AARSP49588 968 aaKnown RBP eCLIP13.58□□□□□ -0.24
PVT1-203ENST00000513868 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
PVT1-203ENST00000513868 TAS2R40P59535 323 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 VSNL1P62760 191 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 MRPS25P82663 173 aaKnown RBP13.58□□□□□ -0.24
PVT1-203ENST00000513868 ZNF268Q14587 947 aaPredicted RBP13.58□□□□□ -0.24
PVT1-203ENST00000513868 DNAJC24Q6P3W2 148 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 CD300LGQ6UXG3 332 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 JOSD2Q8TAC2 188 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 SLC35F5Q8WV83 523 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 MCRS1Q96EZ8 462 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 MCEEQ96PE7 176 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 AP1M1Q9BXS5 423 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 RNF208Q9H0X6 261 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 UBN1Q9NPG3 1134 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 ZNF446Q9NWS9 450 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 IP6K2Q9UHH9 426 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 DMGDHQ9UI17 866 aaKnown RBP13.58□□□□□ -0.24
PVT1-203ENST00000513868 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.58□□□□□ -0.24
PVT1-203ENST00000513868 MICAL3Q7RTP6 2002 aa13.58□□□□□ -0.24
PVT1-203ENST00000513868 CASTOR2A6NHX0 329 aa13.57□□□□□ -0.24
PVT1-203ENST00000513868 POMCP01189 267 aa13.57□□□□□ -0.24
PVT1-203ENST00000513868 RFC1P35251 1148 aaPredicted RBP13.57□□□□□ -0.24
PVT1-203ENST00000513868 PSMC1P62191 440 aaKnown RBP13.57□□□□□ -0.24
PVT1-203ENST00000513868 TAP1Q03518 808 aa13.57□□□□□ -0.24
PVT1-203ENST00000513868 WSCD1Q658N2 575 aa13.57□□□□□ -0.24
PVT1-203ENST00000513868 PMF1Q6P1K2 205 aa13.57□□□□□ -0.24
PVT1-203ENST00000513868 SLC24A5Q71RS6 500 aa13.57□□□□□ -0.24
PVT1-203ENST00000513868 ZDHHC14Q8IZN3 488 aa13.57□□□□□ -0.24
PVT1-203ENST00000513868 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
PVT1-203ENST00000513868 SENP8Q96LD8 212 aa13.57□□□□□ -0.24
PVT1-203ENST00000513868 SNX25Q9H3E2 840 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms