RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 SPP2Q13103 211 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 SPOCD1Q6ZMY3 1216 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 POU5F2Q8N7G0 328 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 ZSWIM2Q8NEG5 633 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 UBA3Q8TBC4 463 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 PARD3BQ8TEW8 1205 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 TAGLN3Q9UI15 199 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 ADAMTS3O15072 1205 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 SPAG6O75602 509 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 KRT36O76013 467 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 SERPINB5P36952 375 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 SOX10P56693 466 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 STXBP2Q15833 593 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 Q3C1V9 767 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 POTEAQ6S8J7 498 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 LAYNQ6UX15 382 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 LRP10Q7Z4F1 713 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 MCOLN2Q8IZK6 566 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 EXD1Q8NHP7 514 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 ACTL9Q8TC94 416 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 TIPINQ9BVW5 301 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 PCYOX1Q9UHG3 505 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 SCAF8Q9UPN6 1271 aaKnown RBP8.1□□□□□ -1.11
CLCN3-209ENST00000513761 DNAJC16Q9Y2G8 782 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 SUGT1Q9Y2Z0 365 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 ORC6Q9Y5N6 252 aa8.1□□□□□ -1.11
CLCN3-209ENST00000513761 MYO5BQ9ULV0 1848 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 RBAK-RBAKDNI3L0D1 243 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 LCP1P13796 627 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 ETS1P14921 441 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 GCLCP48506 637 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 SERPINB9P50453 376 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 OCA2Q04671 838 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 MOXD1Q6UVY6 613 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 KDELC2Q7Z4H8 507 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 VPS39Q96JC1 886 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 DDX50Q9BQ39 737 aaKnown RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 ZNF408Q9H9D4 720 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 CSADQ9Y600 493 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 TMEM150BA6NC51 233 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 BTNL10A8MVZ5 291 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 DNALI1O14645 258 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 C21orf2O43822 256 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 EXTL3O43909 919 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 CCNHP51946 323 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 BAATQ14032 418 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 Q4G0T1 1027 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 IRGCQ6NXR0 463 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 MASTLQ96GX5 879 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 SLITRK3O94933 977 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 LCA5LO95447 670 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 KCTD2Q14681 263 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 FAM47CQ5HY64 1035 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 OXNAD1Q96HP4 312 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 KCTD10Q9H3F6 313 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 TASP1Q9H6P5 420 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 RSAD1Q9HA92 442 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 ASTN1O14525 1302 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 AFF2P51816 1311 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 NPTX2P47972 431 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 PRKCEQ02156 737 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 PPP3CAQ08209 521 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 LACTB2Q53H82 288 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 EFHC1Q5JVL4 640 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 TCHHL1Q5QJ38 904 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 RNF43Q68DV7 783 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 CDR2LQ86X02 465 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 SP8Q8IXZ3 490 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 EMC1Q8N766 993 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 CCDC134Q9H6E4 229 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 MRPL40Q9NQ50 206 aaKnown RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 DDX18Q9NVP1 670 aaKnown RBP8.09□□□□□ -1.11
CLCN3-209ENST00000513761 CLEC11AQ9Y240 323 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 NR2E1Q9Y466 385 aa8.09□□□□□ -1.11
CLCN3-209ENST00000513761 TM9SF1O15321 606 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 RASSF9O75901 435 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 PDE5AO76074 875 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 YY1P25490 414 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 PTK6Q13882 451 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 GRIK5Q16478 980 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 TEDDM1Q5T9Z0 273 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 C16orf89Q6UX73 402 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 MFSD7Q6UXD7 560 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 ART4Q93070 314 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 ZNF184Q99676 751 aaPredicted RBP8.09□□□□□ -1.12
CLCN3-209ENST00000513761 KLHL4Q9C0H6 718 aa8.09□□□□□ -1.12
CLCN3-209ENST00000513761 FAM49AQ9H0Q0 323 aaPredicted RBP8.09□□□□□ -1.12
CLCN3-209ENST00000513761 PSMG1O95456 288 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 CLPTM1O96005 669 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 RPL10AP62906 217 aaKnown RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 TRMT5Q32P41 509 aaKnown RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 ARHGAP22Q7Z5H3 698 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 IFNEQ86WN2 208 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 EPS8L1Q8TE68 723 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 STK32BQ9NY57 414 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 STARD13Q9Y3M8 1113 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 E9PBE3 544 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 KLHL41O60662 606 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms