RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 RECQLP46063 649 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-210ENST00000513153 GCLCP48506 637 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-210ENST00000513153 TOB1P50616 345 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-210ENST00000513153 FOXG1P55316 489 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-210ENST00000513153 KLF9Q13886 244 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-210ENST00000513153 ETFDHQ16134 617 aa4.84□□□□□ -1.63
LINC01088-210ENST00000513153 ZNF66Q6ZN08 573 aa4.84□□□□□ -1.63
LINC01088-210ENST00000513153 ZNF551Q7Z340 670 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-210ENST00000513153 PPP1R32Q7Z5V6 425 aa4.84□□□□□ -1.63
LINC01088-210ENST00000513153 FAM109AQ8N4B1 249 aa4.84□□□□□ -1.63
LINC01088-210ENST00000513153 RPL36ALQ969Q0 106 aaKnown RBP4.84□□□□□ -1.63
LINC01088-210ENST00000513153 NELL2Q99435 816 aa4.84□□□□□ -1.63
LINC01088-210ENST00000513153 TINAGL1Q9GZM7 467 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-210ENST00000513153 ABCF2Q9UG63 623 aa4.84□□□□□ -1.63
LINC01088-210ENST00000513153 BTBD3Q9Y2F9 522 aa4.84□□□□□ -1.63
LINC01088-210ENST00000513153 DTNBO60941 627 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 SNUPNO95149 360 aaKnown RBP4.83□□□□□ -1.64
LINC01088-210ENST00000513153 GNAI2P04899 355 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 EBLN1P0CF75 366 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 NHLRC4P0CG21 123 aaPredicted RBP4.83□□□□□ -1.64
LINC01088-210ENST00000513153 JUPP14923 745 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 NDUFB7P17568 137 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 TUBA4AP68366 448 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 GRM1Q13255 1194 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 PROSER3Q2NL68 480 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 TMEM119Q4V9L6 283 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 VPS53Q5VIR6 699 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 FAM160B1Q5W0V3 765 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 USP45Q70EL2 814 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 CPA6Q8N4T0 437 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 ATRIPQ8WXE1 791 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 REPS1Q96D71 796 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 FAM167AQ96KS9 214 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 ARHGEF3Q9NR81 526 aa4.83□□□□□ -1.64
LINC01088-210ENST00000513153 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 CYSRT1A8MQ03 144 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 H3BNC9 293 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 ZNF213O14771 459 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 NXPH3O95157 252 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 FTLP02792 175 aaPredicted RBP4.82□□□□□ -1.64
LINC01088-210ENST00000513153 POU2F2P09086 479 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 TYRP14679 529 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 ALDH9A1P49189 494 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 TEDDM1Q5T9Z0 273 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 CEP85Q6P2H3 762 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 NEK8Q86SG6 692 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 DTX2Q86UW9 622 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 ASPSCR1Q9BZE9 553 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 SEMA4CQ9C0C4 833 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.82□□□□□ -1.64
LINC01088-210ENST00000513153 LMBRD1Q9NUN5 540 aa4.82□□□□□ -1.64
LINC01088-210ENST00000513153 FEZ2Q9UHY8 353 aaPredicted RBP4.82□□□□□ -1.64
LINC01088-210ENST00000513153 M0QYG6 137 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 PPM1DO15297 605 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 JTBO76095 146 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 KELP23276 732 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 MAP2K6P52564 334 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 BOP1Q14137 746 aaKnown RBP4.81□□□□□ -1.64
LINC01088-210ENST00000513153 SLC44A4Q53GD3 710 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 ZNF618Q5T7W0 954 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 ICE2Q659A1 982 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 SFRP4Q6FHJ7 346 aaPredicted RBP4.81□□□□□ -1.64
LINC01088-210ENST00000513153 TMEM108Q6UXF1 575 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 TECPR1Q7Z6L1 1165 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 PPP1R3BQ86XI6 285 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.81□□□□□ -1.64
LINC01088-210ENST00000513153 KLHDC4Q8TBB5 520 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 SMAD5Q99717 465 aaKnown RBP4.81□□□□□ -1.64
LINC01088-210ENST00000513153 SERHLQ9NQF3 203 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 PNPOQ9NVS9 261 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 TBC1D30Q9Y2I9 924 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 PCDHA1Q9Y5I3 950 aa4.81□□□□□ -1.64
LINC01088-210ENST00000513153 TISP43B9A030 160 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 MOSPD3O75425 235 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 AHSGP02765 367 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 PDHA1P08559 390 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 EPHB2P29323 1055 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 AARS2Q5JTZ9 985 aaKnown RBP4.8□□□□□ -1.64
LINC01088-210ENST00000513153 SLC9A4Q6AI14 798 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 ANKRD16Q6P6B7 361 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 FAM46DQ8NEK8 389 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 TBC1D5Q92609 795 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 PUS7Q96PZ0 661 aaKnown RBP4.8□□□□□ -1.64
LINC01088-210ENST00000513153 BHMT2Q9H2M3 363 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 LRP12Q9Y561 859 aa4.8□□□□□ -1.64
LINC01088-210ENST00000513153 CACNA1IQ9P0X4 2223 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 SLC16A3O15427 465 aaKnown RBP4.79□□□□□ -1.64
LINC01088-210ENST00000513153 TLR5O60602 858 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 IL33O95760 270 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 PIM1P11309 404 aaPredicted RBP4.79□□□□□ -1.64
LINC01088-210ENST00000513153 SFPQP23246 707 aaKnown RBP eCLIP4.79□□□□□ -1.64
LINC01088-210ENST00000513153 PGS1Q32NB8 556 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 LONRF3Q496Y0 759 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 AMOTQ4VCS5 1084 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 TMEM240Q5SV17 173 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 EMC10Q5UCC4 262 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 MORN5Q5VZ52 161 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 LAYNQ6UX15 382 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 SLC29A4Q7RTT9 530 aa4.79□□□□□ -1.64
LINC01088-210ENST00000513153 WDR53Q7Z5U6 358 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms