RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 BSNQ9UPA5 3926 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 SMCO2A6NFE2 343 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 ADAM23O75077 832 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 ZNF217O75362 1048 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 GABRG2P18507 467 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 PSMC5P62195 406 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 TFDP1Q14186 410 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 ZNF268Q14587 947 aaPredicted RBP10.28□□□□□ -0.76
CLCN3-208ENST00000512813 MTF1Q14872 753 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 EMC2Q15006 297 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 EML3Q32P44 896 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 GLRA4Q5JXX5 417 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 JAKMIP3Q5VZ66 844 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 B3GNT9Q6UX72 402 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 USP49Q70CQ1 688 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 SGMS1Q86VZ5 419 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 ZCCHC9Q8N567 271 aaKnown RBP10.28□□□□□ -0.76
CLCN3-208ENST00000512813 FAM26EQ8N5C1 309 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
CLCN3-208ENST00000512813 OSCP1Q8WVF1 389 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 NAF1Q96HR8 494 aaKnown RBP10.28□□□□□ -0.76
CLCN3-208ENST00000512813 CEP170P1Q96L14 293 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
CLCN3-208ENST00000512813 DUS2Q9NX74 493 aaKnown RBP10.28□□□□□ -0.76
CLCN3-208ENST00000512813 FTSJ1Q9UET6 329 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 SSUH2Q9Y2M2 353 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 CACNA1DQ01668 2161 aa10.28□□□□□ -0.76
CLCN3-208ENST00000512813 CSMD1Q96PZ7 3565 aa10.27□□□□□ -0.76
CLCN3-208ENST00000512813 DENND4CQ5VZ89 1909 aa10.27□□□□□ -0.76
CLCN3-208ENST00000512813 ZNF638Q14966 1978 aaKnown RBP10.27□□□□□ -0.77
CLCN3-208ENST00000512813 MTORP42345 2549 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 hCG_1984214I3L0E3 225 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 K7ENP7 123 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 PSMD10O75832 226 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 DDX6P26196 483 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLCN3-208ENST00000512813 MAOBP27338 520 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 ANTXR2P58335 489 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 DUSP4Q13115 394 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 NR1H3Q13133 447 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 CAPSQ13938 189 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 INO80CQ6PI98 192 aaPredicted RBP10.27□□□□□ -0.77
CLCN3-208ENST00000512813 XKR5Q6UX68 686 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 TMTC3Q6ZXV5 915 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 DHX40Q8IX18 779 aaKnown RBP10.27□□□□□ -0.77
CLCN3-208ENST00000512813 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 ZNF713Q8N859 430 aaPredicted RBP10.27□□□□□ -0.77
CLCN3-208ENST00000512813 KCNE4Q8WWG9 221 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 DNASE2BQ8WZ79 361 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 ZNF578Q96N58 590 aaPredicted RBP10.27□□□□□ -0.77
CLCN3-208ENST00000512813 LRRC4CQ9HCJ2 640 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 GPRC5CQ9NQ84 441 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 PCNX1Q96RV3 2341 aa10.27□□□□□ -0.77
CLCN3-208ENST00000512813 ANO9A1A5B4 782 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 TRIM66O15016 1216 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 PCDHGA12O60330 932 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 RFPL3O75679 317 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 C1SP09871 688 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 SDSP20132 328 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 TIE1P35590 1138 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 KIR2DL1P43626 348 aaPredicted RBP10.26□□□□□ -0.77
CLCN3-208ENST00000512813 IFNAR2P48551 515 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 PTH1RQ03431 593 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 INAVAQ3KP66 663 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 CENPPQ6IPU0 288 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 FBXL19Q6PCT2 694 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 RALYLQ86SE5 291 aaKnown RBP10.26□□□□□ -0.77
CLCN3-208ENST00000512813 MAB21L3Q8N8X9 362 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 APPL2Q8NEU8 664 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 SUSD3Q96L08 255 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 PRIMPOLQ96LW4 560 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 PGLYRP2Q96PD5 576 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 DPH1Q9BZG8 443 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 PLEKHB1Q9UF11 243 aaPredicted RBP10.26□□□□□ -0.77
CLCN3-208ENST00000512813 CYP8B1Q9UNU6 501 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 WNT6Q9Y6F9 365 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 CNTNAP5Q8WYK1 1306 aa10.26□□□□□ -0.77
CLCN3-208ENST00000512813 OBSL1O75147 1896 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 PODXLO00592 558 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 KLK10O43240 276 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 NDUFS2O75306 463 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 ITGB6P18564 788 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 RXRAP19793 462 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 SOX4Q06945 474 aaPredicted RBP10.25□□□□□ -0.77
CLCN3-208ENST00000512813 USP4Q13107 963 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 SF3A1Q15459 793 aaKnown RBP10.25□□□□□ -0.77
CLCN3-208ENST00000512813 ZNF77Q15935 545 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 GAB4Q2WGN9 574 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 TMEM150AQ86TG1 271 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 SFTPA1Q8IWL2 248 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 CACTIN-AS1Q8N1I8 211 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 DDX12PQ92771 950 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 GJA10Q969M2 543 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 MTRQ99707 1265 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 PDZD7Q9H5P4 517 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 XPNPEP1Q9NQW7 623 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 BARHL2Q9NY43 387 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 HSFX1Q9UBD0 423 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 NUB1Q9Y5A7 615 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 CRYBG3Q68DQ2 2970 aa10.25□□□□□ -0.77
CLCN3-208ENST00000512813 PDZD2O15018 2839 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms