RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 DEFB103AP81534 67 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 HTRA4P83105 476 aaPredicted RBP10.11□□□□□ -0.79
MSH3-203ENST00000512531 DMTNQ08495 405 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 PPFIA1Q13136 1202 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 TERF2Q15554 542 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 LY6KQ17RY6 165 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 TAF3Q5VWG9 929 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 DPY19L2P1Q6NXN4 242 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 LEKR1Q6ZMV7 388 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 PLPPR4Q7Z2D5 763 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 CCDC60Q8IWA6 550 aaPredicted RBP10.11□□□□□ -0.79
MSH3-203ENST00000512531 FAM71AQ8IYT1 594 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 SLC35G2Q8TBE7 412 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 PSPC1Q8WXF1 523 aaKnown RBP10.11□□□□□ -0.79
MSH3-203ENST00000512531 EXOC4Q96A65 974 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 MSTO1Q9BUK6 570 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 DNAI2Q9GZS0 605 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 ISCUQ9H1K1 167 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 SMARCAD1Q9H4L7 1026 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 DHX33Q9H6R0 707 aaKnown RBP10.11□□□□□ -0.79
MSH3-203ENST00000512531 GPRC5CQ9NQ84 441 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 PSD3Q9NYI0 1048 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 CWC15Q9P013 229 aaKnown RBP10.11□□□□□ -0.79
MSH3-203ENST00000512531 PARP2Q9UGN5 583 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 ARID2Q68CP9 1835 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 COL4A6Q14031 1691 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 MUC6Q6W4X9 2439 aa10.11□□□□□ -0.79
MSH3-203ENST00000512531 IGKV6D-21A0A0A0MT36 114 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 GOLGA8IPA6NC78 632 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 GOLGA8JA6NMD2 632 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 LRRIQ3A6PVS8 624 aaPredicted RBP10.1□□□□□ -0.79
MSH3-203ENST00000512531 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 FOXN3O00409 490 aaPredicted RBP10.1□□□□□ -0.79
MSH3-203ENST00000512531 KRIT1O00522 736 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 CLDN3O15551 220 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 MAFO75444 373 aaPredicted RBP10.1□□□□□ -0.79
MSH3-203ENST00000512531 FTLP02792 175 aaPredicted RBP10.1□□□□□ -0.79
MSH3-203ENST00000512531 AMHP03971 560 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 ALADP13716 330 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 ABCB4P21439 1286 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 UBA1P22314 1058 aaKnown RBP10.1□□□□□ -0.79
MSH3-203ENST00000512531 HOXC8P31273 242 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 CXCR5P32302 372 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 ARL2P36404 184 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 AARSP49588 968 aaKnown RBP eCLIP10.1□□□□□ -0.79
MSH3-203ENST00000512531 DNA2P51530 1060 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 CDR2Q01850 454 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 PPP3CAQ08209 521 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 COL19A1Q14993 1142 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 MAPK6Q16659 721 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 PTPROQ16827 1216 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 CFAP58Q5T655 872 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 GJB7Q6PEY0 223 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 CROCCP2Q86T23 111 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 SERINC5Q86VE9 423 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 CBWD2Q8IUF1 395 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 LRRC57Q8N9N7 239 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 GDPD5Q8WTR4 605 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 SHC3Q92529 594 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 CAVIN3Q969G5 261 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 MRPL38Q96DV4 380 aaKnown RBP10.1□□□□□ -0.79
MSH3-203ENST00000512531 SAAL1Q96ER3 474 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 FAM213AQ9BRX8 229 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 TCHPQ9BT92 498 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 PACSIN1Q9BY11 444 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 FAM129AQ9BZQ8 928 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 SAP130Q9H0E3 1048 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 KCNH6Q9H252 994 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 EPC1Q9H2F5 836 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 MRPL47Q9HD33 250 aaKnown RBP10.1□□□□□ -0.79
MSH3-203ENST00000512531 C11orf16Q9NQ32 467 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 FAM114A2Q9NRY5 505 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 RBAKQ9NYW8 714 aaPredicted RBP10.1□□□□□ -0.79
MSH3-203ENST00000512531 GTF3C4Q9UKN8 822 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 NENFQ9UMX5 172 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 CEP83Q9Y592 693 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 PCDHB2Q9Y5E7 798 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 STYXL1Q9Y6J8 313 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 SIP14410 1827 aa10.1□□□□□ -0.79
MSH3-203ENST00000512531 COL4A4P53420 1690 aaPredicted RBP10.09□□□□□ -0.79
MSH3-203ENST00000512531 NDC80O14777 642 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 POLR3GO15318 223 aaPredicted RBP10.09□□□□□ -0.79
MSH3-203ENST00000512531 MAGEB2O15479 319 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 NCK2O43639 380 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 SPOPO43791 374 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 ZNF862O60290 1169 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 HBP1O60381 514 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 MTA2O94776 668 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 HEXIM1O94992 359 aaKnown RBP10.09□□□□□ -0.79
MSH3-203ENST00000512531 TCF3P15923 654 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 NPR3P17342 541 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 VAMP1P23763 118 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 TMOD1P28289 359 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 TCF7P36402 384 aaPredicted RBP10.09□□□□□ -0.79
MSH3-203ENST00000512531 SLC1A1P43005 524 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 POU5F1Q01860 360 aaKnown RBP10.09□□□□□ -0.79
MSH3-203ENST00000512531 DHX34Q14147 1143 aaKnown RBP10.09□□□□□ -0.79
MSH3-203ENST00000512531 MBTPS1Q14703 1052 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 TIGD5Q53EQ6 642 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 PLEKHG4Q58EX7 1191 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms