RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 RASIP1Q5U651 963 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 DCAF12L1Q5VU92 463 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 RUFY4Q6ZNE9 571 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 LRRC52Q8N7C0 313 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 C7orf31Q8N865 590 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 AENQ8WTP8 325 aaKnown RBP13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 MAIP1Q8WWC4 291 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 CAVIN3Q969G5 261 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 HPDLQ96IR7 371 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 PPP1R16BQ96T49 567 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 KRT12Q99456 494 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 UBXN6Q9BZV1 441 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 CNTN3Q9P232 1028 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 DMGDHQ9UI17 866 aaKnown RBP13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 ANAPC7Q9UJX3 599 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 SEPT4O43236 478 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 ATMINO43313 823 aaPredicted RBP13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 CILPO75339 1184 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 SASH3O75995 380 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 FGGP02679 453 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 CD58P19256 250 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 POLR2BP30876 1174 aaKnown RBP13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 CUL1Q13616 776 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 ZBTB6Q15916 424 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 WDR72Q3MJ13 1102 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 RPAINQ86UA6 219 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 RSPH3Q86UC2 560 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 TRPV1Q8NER1 839 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 BEST2Q8NFU1 509 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 DNAJB3Q8WWF6 145 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 ALG3Q92685 438 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 KIF12Q96FN5 646 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 CNTNAP3BQ96NU0 1288 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 OSMRQ99650 979 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 PRRX2Q99811 253 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 CNTNAP3Q9BZ76 1288 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 DNAI2Q9GZS0 605 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 WDR35Q9P2L0 1181 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 NXF1Q9UBU9 619 aaKnown RBP13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 MTUS1Q9ULD2 1270 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 AGAP1Q9UPQ3 857 aa13.9□□□□□ -0.18
DEPDC1B-206ENST00000512452 MED19A0JLT2 244 aaPredicted RBP13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 FAM187AA6NFU0 413 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 TMEM110-MUSTN1A8MSY1 372 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 TREHO43280 583 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 SART1O43290 800 aaKnown RBP13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 PSTPIP1O43586 416 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 HEXIM1O94992 359 aaKnown RBP13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 CD4P01730 458 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 WEE2P0C1S8 567 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 VDRP11473 427 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 KCNE1P15382 129 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 ATF7P17544 494 aaPredicted RBP13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 PLA2G4AP47712 749 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 RAD23BP54727 409 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 MAMLD1Q13495 774 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 DHX34Q14147 1143 aaKnown RBP13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 CASP8Q14790 479 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 XKR4Q5GH76 650 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 TMEM240Q5SV17 173 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 ALKAL1Q6UXT8 129 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 MMS22LQ6ZRQ5 1243 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 SESTD1Q86VW0 696 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 FEZF2Q8TBJ5 459 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 HDAC7Q8WUI4 952 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 LENG1Q96BZ8 264 aaPredicted RBP13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 TMEM176AQ96HP8 235 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 C11orf70Q9BRQ4 267 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 TRIM6Q9C030 488 aaPredicted RBP13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 MIS12Q9H081 205 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 FAM86C1Q9NVL1 165 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 IP6K2Q9UHH9 426 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 BARX2Q9UMQ3 279 aaPredicted RBP13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 UBQLN1Q9UMX0 589 aaKnown RBP13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 POLIQ9UNA4 740 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 YBX2Q9Y2T7 364 aaKnown RBP13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 CHD8Q9HCK8 2581 aa13.89□□□□□ -0.19
DEPDC1B-206ENST00000512452 TCRBV5S1A1TA0A578 114 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 M0QZ92 97 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 TLR3O15455 904 aaKnown RBP13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 RAD51CO43502 376 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 PHF2O75151 1096 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 CALCAP01258 141 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 RARBP10826 455 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 CYP3A5P20815 502 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 BRD2P25440 801 aaKnown RBP13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 CST5P28325 142 aaPredicted RBP13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 CHRNA3P32297 505 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 GBP1P32455 592 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 PNPLA4P41247 253 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 AARSP49588 968 aaKnown RBP eCLIP13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 FAM193AP78312 1265 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 BEX3Q00994 111 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 PTPN11Q06124 597 aaPredicted RBP13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 TCF15Q12870 199 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 HIC1Q14526 733 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 CYP1B1Q16678 543 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms