RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 PRRT2Q7Z6L0 340 aaPredicted RBP9.73□□□□□ -0.85
CPNE4-210ENST00000512332 TRABD2AQ86V40 505 aa9.73□□□□□ -0.85
CPNE4-210ENST00000512332 GLIS1Q8NBF1 620 aa9.73□□□□□ -0.85
CPNE4-210ENST00000512332 SMARCAD1Q9H4L7 1026 aa9.73□□□□□ -0.85
CPNE4-210ENST00000512332 VRTNQ9H8Y1 702 aa9.73□□□□□ -0.85
CPNE4-210ENST00000512332 SAYSD1Q9NPB0 183 aa9.73□□□□□ -0.85
CPNE4-210ENST00000512332 FGFR1OP2Q9NVK5 253 aa9.73□□□□□ -0.85
CPNE4-210ENST00000512332 HAUS2Q9NVX0 235 aa9.73□□□□□ -0.85
CPNE4-210ENST00000512332 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.73□□□□□ -0.85
CPNE4-210ENST00000512332 SLC24A2Q9UI40 661 aa9.73□□□□□ -0.85
CPNE4-210ENST00000512332 ARL2BPQ9Y2Y0 163 aa9.73□□□□□ -0.85
CPNE4-210ENST00000512332 FARP1Q9Y4F1 1045 aaPredicted RBP9.73□□□□□ -0.85
CPNE4-210ENST00000512332 CSADQ9Y600 493 aa9.73□□□□□ -0.85
CPNE4-210ENST00000512332 LRRC37A2A6NM11 1700 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 DNAJC25-GNG10A0A024R161 153 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 EXOC1LA0A1B0GW35 172 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 RASA4BC9J798 803 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 NOP56O00567 594 aaKnown RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 CXCL11O14625 94 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 RASA4O43374 803 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 HBP1O60381 514 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 ARIH2O95376 493 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 GCAP28676 217 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 ATICP31939 592 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 RFC1P35251 1148 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 GABRB2P47870 512 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 MNAT1P51948 309 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 IL9RQ01113 521 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 ACVR2BQ13705 512 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 FAM187BQ17R55 369 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 PTPN20Q4JDL3 420 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 ZNF394Q53GI3 561 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 TXNRD3NBQ6F5E7 133 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 DENND1BQ6P3S1 775 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 CCDC62Q6P9F0 684 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 PARP9Q8IXQ6 854 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 SRRM1Q8IYB3 904 aaKnown RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 DENND1AQ8TEH3 1009 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 FGD4Q96M96 766 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 SSU72Q9NP77 194 aaKnown RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 KLHL11Q9NVR0 708 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 SMG5Q9UPR3 1016 aaKnown RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 LRCH4O75427 683 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 CNMDO75829 334 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 ZSCAN5DPP0CG00 497 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 TSHRP16473 764 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 PSMA2P25787 234 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 NF2P35240 595 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 RDXP35241 583 aaKnown RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 RAD23BP54727 409 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 IRX3P78415 501 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 MBTD1Q05BQ5 628 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 CBLBQ13191 982 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 RIPK1Q13546 671 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 MTFR1Q15390 333 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 ZNF667Q5HYK9 610 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 CYP4F22Q6NT55 531 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 SPATA21Q7Z572 469 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 PRUNE1Q86TP1 453 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 IFNLR1Q8IU57 520 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 RHPN2Q8IUC4 686 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 LRRC71Q8N4P6 559 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 ARFGAP1Q8N6T3 406 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 ANKRD42Q8N9B4 389 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 CMASQ8NFW8 434 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 MGARPQ8TDB4 240 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 PRCCQ92733 491 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 TGS1Q96RS0 853 aaKnown RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 RPF1Q9H9Y2 349 aaKnown RBP9.72□□□□□ -0.85
CPNE4-210ENST00000512332 CYP3A43Q9HB55 503 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 TBK1Q9UHD2 729 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 SIX4Q9UIU6 781 aa9.72□□□□□ -0.85
CPNE4-210ENST00000512332 ASMTLO95671 621 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 GH1P01241 217 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 TAC1P20366 129 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 KDELR1P24390 212 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 PLCB3Q01970 1234 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 TNFAIP2Q03169 654 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 CCDC15Q0P6D6 951 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 SNCBQ16143 134 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 KYAT1Q16773 422 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 CYP4A22Q5TCH4 519 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 RNF43Q68DV7 783 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 PPIL6Q8IXY8 311 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 DHX37Q8IY37 1157 aaKnown RBP9.71□□□□□ -0.85
CPNE4-210ENST00000512332 CXorf38Q8TB03 319 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 MCRS1Q96EZ8 462 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 SPATA33Q96N06 139 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 ASCC2Q9H1I8 757 aaPredicted RBP9.71□□□□□ -0.85
CPNE4-210ENST00000512332 CDT1Q9H211 546 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 ASB7Q9H672 318 aa9.71□□□□□ -0.85
CPNE4-210ENST00000512332 PRMT7Q9NVM4 692 aaPredicted RBP9.71□□□□□ -0.85
CPNE4-210ENST00000512332 ZMYND8Q9ULU4 1186 aaPredicted RBP9.71□□□□□ -0.85
CPNE4-210ENST00000512332 PAPPA2Q9BXP8 1791 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 E7ESA3 106 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 INO80B-WBP1J3KQ70 363 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 SGK1O00141 431 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 PEX10O60683 326 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 HMGCRP04035 888 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 MCF2P10911 925 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms