RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 TRIM49P0CI25 452 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 TRIM49CP0CI26 452 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 VIPR2P41587 438 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 RAP1GAPP47736 663 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 LHX1P48742 406 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 VEPH1Q14D04 833 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 DDR2Q16832 855 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 ZCWPW2Q504Y3 356 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 SCARA5Q6ZMJ2 495 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 ZSCAN18Q8TBC5 510 aaPredicted RBP17.66■□□□□ 0.42
DDX41-213ENST00000512027 C2orf15Q8WU43 125 aaKnown RBP17.66■□□□□ 0.42
DDX41-213ENST00000512027 MYLPFQ96A32 169 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 ASB16Q96NS5 453 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 ATXN3LQ9H3M9 355 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 SMYD3Q9H7B4 428 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDX41-213ENST00000512027 WNT16Q9UBV4 365 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 ASB3Q9Y575 518 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 PCDHA5Q9Y5H7 936 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 GREB1Q4ZG55 1949 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 ECI2O75521 394 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 MICAL2O94851 1124 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 KIF20AO95235 890 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 WARSP23381 471 aaKnown RBP17.65■□□□□ 0.42
DDX41-213ENST00000512027 PCSK1P29120 753 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 TNNC1P63316 161 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 CLDN10P78369 228 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 NCOA4Q13772 614 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 NFE2Q16621 373 aaPredicted RBP17.65■□□□□ 0.42
DDX41-213ENST00000512027 ISM2Q6H9L7 571 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 ASTLQ6HA08 431 aaPredicted RBP17.65■□□□□ 0.42
DDX41-213ENST00000512027 DPH6Q7L8W6 267 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 ITIH5Q86UX2 942 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 LEMD2Q8NC56 503 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 TMEM174Q8WUU8 243 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 RSPRY1Q96DX4 576 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 CCDC34Q96HJ3 373 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 MKNK1Q9BUB5 465 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 DPEP3Q9H4B8 488 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 IL21Q9HBE4 155 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 ARHGEF3Q9NR81 526 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 SLC2A4RGQ9NR83 387 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 CIZ1Q9ULV3 898 aaPredicted RBP17.65■□□□□ 0.42
DDX41-213ENST00000512027 FRMD4BQ9Y2L6 1034 aa17.65■□□□□ 0.42
DDX41-213ENST00000512027 STK25O00506 426 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 PRCPP42785 496 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 CDH8P55286 799 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 SMARCB1Q12824 385 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 ZNF699Q32M78 642 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 VITQ6UXI7 678 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 SPATA2LQ8IUW3 424 aaPredicted RBP17.64■□□□□ 0.41
DDX41-213ENST00000512027 SCN4BQ8IWT1 228 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 FAM186BQ8IYM0 893 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 OR6B3Q8NGW1 331 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 SPATA18Q8TC71 538 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 TMC2Q8TDI7 906 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 SMARCD2Q92925 531 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 ELSPBP1Q96BH3 223 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 SDCBP2Q9H190 292 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 SNX25Q9H3E2 840 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 MMRN2Q9H8L6 949 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 TBC1D17Q9HA65 648 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 ZFP14Q9HCL3 533 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 CDH9Q9ULB4 789 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 MAGED2Q9UNF1 606 aaPredicted RBP17.64■□□□□ 0.41
DDX41-213ENST00000512027 MIA3Q5JRA6 1907 aa17.64■□□□□ 0.41
DDX41-213ENST00000512027 ZNF638Q14966 1978 aaKnown RBP17.64■□□□□ 0.41
DDX41-213ENST00000512027 STAU1O95793 577 aaKnown RBP17.63■□□□□ 0.41
DDX41-213ENST00000512027 HMGA1P17096 107 aaKnown RBP17.63■□□□□ 0.41
DDX41-213ENST00000512027 PLA2G5P39877 138 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 VAMP7P51809 220 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 ADAM9Q13443 819 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 TAF12Q16514 161 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 NFIL3Q16649 462 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 ZACNQ401N2 412 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 MDH1BQ5I0G3 518 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 GPR158Q5T848 1215 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 ZNF658Q5TYW1 1059 aaPredicted RBP17.63■□□□□ 0.41
DDX41-213ENST00000512027 SPOPLQ6IQ16 392 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 FAM171BQ6P995 826 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 SV2AQ7L0J3 742 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 SPATA20Q8TB22 786 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 SMARCE1Q969G3 411 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 SYAP1Q96A49 352 aaPredicted RBP17.63■□□□□ 0.41
DDX41-213ENST00000512027 TIGD1Q96MW7 591 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 RMND1Q9NWS8 449 aa17.63■□□□□ 0.41
DDX41-213ENST00000512027 TRIM49BA6NDI0 452 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 LRRN2O75325 713 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 TACC1O75410 805 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 SMC2O95347 1197 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 AOC1P19801 751 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 RFX1P22670 979 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 BDNFP23560 247 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 ATICP31939 592 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 GNL1P36915 607 aaPredicted RBP17.62■□□□□ 0.41
DDX41-213ENST00000512027 GCLMP48507 274 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 PMS1P54277 932 aaKnown RBP17.62■□□□□ 0.41
DDX41-213ENST00000512027 CYP27A1Q02318 531 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 PPP3CAQ08209 521 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 TCF15Q12870 199 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms