RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 PLXNB3Q9ULL4 1909 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 TOM1L1O75674 476 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 F11P03951 625 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 ATF6P18850 670 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.46e-8■□□□□ 9.9
RNF4-216ENST00000511859 HOXD12P35452 270 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
RNF4-216ENST00000511859 HAUS3Q68CZ6 603 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 TAS1R3Q7RTX0 852 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 TMEM150AQ86TG1 271 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 MON1AQ86VX9 555 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 MDGA1Q8NFP4 955 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 USP33Q8TEY7 942 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 OSCP1Q8WVF1 389 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 ATP2A3Q93084 1043 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 SPACA7Q96KW9 195 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 TSPAN18Q96SJ8 248 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 TMEM60Q9H2L4 133 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 BHMT2Q9H2M3 363 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 CCDC86Q9H6F5 360 aaKnown RBP12.55□□□□□ -0.4
RNF4-216ENST00000511859 C17orf75Q9HAS0 396 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 TMEM74BQ9NUR3 256 aa12.55□□□□□ -0.4
RNF4-216ENST00000511859 DUS2Q9NX74 493 aaKnown RBP12.55□□□□□ -0.4
RNF4-216ENST00000511859 ANK1P16157 1881 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 TTC26A0AVF1 554 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 OPHN1O60890 802 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 CLTAP09496 248 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 ODC1P11926 461 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 HARSP12081 509 aaKnown RBP12.54□□□□□ -0.4
RNF4-216ENST00000511859 P2RY2P41231 377 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 NLRP12P59046 1061 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 LILRA4P59901 499 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 MTF1Q14872 753 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 NOLC1Q14978 699 aaKnown RBP eCLIP12.54□□□□□ -0.4
RNF4-216ENST00000511859 CRY1Q16526 586 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 DUOXA1Q1HG43 343 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 SLC39A12Q504Y0 691 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 PEAR1Q5VY43 1037 aaPredicted RBP12.54□□□□□ -0.4
RNF4-216ENST00000511859 NAIF1Q69YI7 327 aaPredicted RBP12.54□□□□□ -0.4
RNF4-216ENST00000511859 TXNDC8Q6A555 127 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 GLIS3Q8NEA6 775 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 SPPL2BQ8TCT7 592 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 GIPC2Q8TF65 315 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 MRPS31Q92665 395 aaKnown RBP12.54□□□□□ -0.4
RNF4-216ENST00000511859 ZBTB45Q96K62 511 aaPredicted RBP12.54□□□□□ -0.4
RNF4-216ENST00000511859 SENP8Q96LD8 212 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 NTPCRQ9BSD7 190 aaKnown RBP12.54□□□□□ -0.4
RNF4-216ENST00000511859 TM6SF1Q9BZW5 370 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 SCUBE2Q9NQ36 999 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 ORC3Q9UBD5 711 aaPredicted RBP12.54□□□□□ -0.4
RNF4-216ENST00000511859 PILRBQ9UKJ0 227 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 MMP17Q9ULZ9 603 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 SLC6A14Q9UN76 642 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 OBSL1O75147 1896 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 PLXND1Q9Y4D7 1925 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 MYH11P35749 1972 aa12.54□□□□□ -0.4
RNF4-216ENST00000511859 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 BTBD18B2RXH4 712 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 K7EQS6 105 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 WNT7AO00755 349 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 CLDN3O15551 220 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 REC8O95072 547 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 CYP11A1P05108 521 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 PTGER3P43115 390 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 IFNAR2P48551 515 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 MRPS21P82921 87 aaKnown RBP12.53□□□□□ -0.4
RNF4-216ENST00000511859 FAM160A1Q05DH4 1040 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 GFPT1Q06210 699 aaPredicted RBP12.53□□□□□ -0.4
RNF4-216ENST00000511859 STRN3Q13033 797 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 C2orf27AQ580R0 203 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 LYSMD4Q5XG99 296 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 RABEPKQ7Z6M1 372 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 TMEFF1Q8IYR6 380 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 THEM5Q8N1Q8 247 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 BBC3Q96PG8 261 aaPredicted RBP12.53□□□□□ -0.4
RNF4-216ENST00000511859 FNBP1Q96RU3 617 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 ZCWPW1Q9H0M4 648 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 MBD1Q9UIS9 605 aaPredicted RBP12.53□□□□□ -0.4
RNF4-216ENST00000511859 DSEQ9UL01 958 aa12.53□□□□□ -0.4
RNF4-216ENST00000511859 EPB41L2O43491 1005 aaKnown RBP12.52□□□□□ -0.41
RNF4-216ENST00000511859 ZIC2O95409 532 aaPredicted RBP12.52□□□□□ -0.41
RNF4-216ENST00000511859 SERPINF2P08697 491 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 CSH1P0DML2 217 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 CSH2P0DML3 217 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 CXCL8P10145 99 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 HAPLN1P10915 354 aaPredicted RBP12.52□□□□□ -0.41
RNF4-216ENST00000511859 HMGA1P17096 107 aaKnown RBP12.52□□□□□ -0.41
RNF4-216ENST00000511859 NMT1P30419 496 aaKnown RBP12.52□□□□□ -0.41
RNF4-216ENST00000511859 MCM7P33993 719 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 FAM193AP78312 1265 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 PPP2R3AQ06190 1150 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 SPAG1Q07617 926 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 MCL1Q07820 350 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 SLC14A1Q13336 389 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 TRIP6Q15654 476 aaKnown RBP12.52□□□□□ -0.41
RNF4-216ENST00000511859 KYAT1Q16773 422 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 EML3Q32P44 896 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 SEZ6Q53EL9 994 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 ZPBP2Q6X784 338 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms