RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 EEF2KMTQ96G04 330 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 SYT15Q9BQS2 421 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 TBC1D17Q9HA65 648 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 IL21Q9HBE4 155 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.13
RNF4-215ENST00000511843 ARHGEF3Q9NR81 526 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 SLC2A4RGQ9NR83 387 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 NXF1Q9UBU9 619 aaKnown RBP14.24□□□□□ -0.13
RNF4-215ENST00000511843 TRAF3IP3Q9Y228 551 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 HELZP42694 1942 aaKnown RBP14.23□□□□□ -0.13
RNF4-215ENST00000511843 GADD45BO75293 160 aaPredicted RBP14.23□□□□□ -0.13
RNF4-215ENST00000511843 ECI2O75521 394 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 MICAL2O94851 1124 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 VNN1O95497 513 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 RFX1P22670 979 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 NR2F2P24468 414 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 PCSK1P29120 753 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 RAP1GAPP47736 663 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 LHX1P48742 406 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 TCF15Q12870 199 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 TRPC3Q13507 836 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 VEPH1Q14D04 833 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 WDR72Q3MJ13 1102 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 C1orf220Q5T0J3 134 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 VITQ6UXI7 678 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 SCARA5Q6ZMJ2 495 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 LEMD2Q8NC56 503 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 C2orf15Q8WU43 125 aaKnown RBP14.23□□□□□ -0.13
RNF4-215ENST00000511843 SMARCD2Q92925 531 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 PHOX2BQ99453 314 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 MKNK1Q9BUB5 465 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 FOXQ1Q9C009 403 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 XYLT2Q9H1B5 865 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 ATXN3LQ9H3M9 355 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 DPEP3Q9H4B8 488 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 SMYD3Q9H7B4 428 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 ZFP14Q9HCL3 533 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 CRTAC1Q9NQ79 661 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 HSFX1Q9UBD0 423 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 ASB3Q9Y575 518 aa14.23□□□□□ -0.13
RNF4-215ENST00000511843 PATJQ8NI35 1801 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 LRRN2O75325 713 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 AKAP3O75969 853 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 C4BPAP04003 597 aaKnown RBP14.22□□□□□ -0.13
RNF4-215ENST00000511843 TRIM49P0CI25 452 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 TRIM49CP0CI26 452 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 HMGA1P17096 107 aaKnown RBP14.22□□□□□ -0.13
RNF4-215ENST00000511843 CD72P21854 359 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 WARSP23381 471 aaKnown RBP14.22□□□□□ -0.13
RNF4-215ENST00000511843 CDH8P55286 799 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 TNNC1P63316 161 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 CLDN10P78369 228 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 NHLH1Q02575 133 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 SMARCB1Q12824 385 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 NCOA4Q13772 614 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 NFE2Q16621 373 aaPredicted RBP14.22□□□□□ -0.13
RNF4-215ENST00000511843 ZNF699Q32M78 642 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 GPR158Q5T848 1215 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 ISM2Q6H9L7 571 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 ITIH5Q86UX2 942 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 SPATA2LQ8IUW3 424 aaPredicted RBP14.22□□□□□ -0.13
RNF4-215ENST00000511843 SCN4BQ8IWT1 228 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 GUF1Q8N442 669 aaKnown RBP14.22□□□□□ -0.13
RNF4-215ENST00000511843 OR6B3Q8NGW1 331 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 MYLPFQ96A32 169 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 ELSPBP1Q96BH3 223 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 SMG9Q9H0W8 520 aaKnown RBP14.22□□□□□ -0.13
RNF4-215ENST00000511843 SNX25Q9H3E2 840 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 MMRN2Q9H8L6 949 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 FAM86C1Q9NVL1 165 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 MAGED2Q9UNF1 606 aaPredicted RBP14.22□□□□□ -0.13
RNF4-215ENST00000511843 FRMD4BQ9Y2L6 1034 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 ARIH1Q9Y4X5 557 aaPredicted RBP14.22□□□□□ -0.13
RNF4-215ENST00000511843 PCDHA5Q9Y5H7 936 aa14.22□□□□□ -0.13
RNF4-215ENST00000511843 MYO16Q9Y6X6 1858 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 H0Y858 1186 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 KIF20AO95235 890 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 PRAMEF12O95522 483 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 AOC1P19801 751 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 BDNFP23560 247 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 PRCPP42785 496 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 CLCN5P51795 746 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 CYP27A1Q02318 531 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 MLF2Q15773 248 aaPredicted RBP14.21□□□□□ -0.13
RNF4-215ENST00000511843 TAF12Q16514 161 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 ZCWPW2Q504Y3 356 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 MDH1BQ5I0G3 518 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 SPOPLQ6IQ16 392 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 FAM171BQ6P995 826 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 DPH6Q7L8W6 267 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 TMEM150AQ86TG1 271 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 SPATA18Q8TC71 538 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 TMC2Q8TDI7 906 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 SYAP1Q96A49 352 aaPredicted RBP14.21□□□□□ -0.13
RNF4-215ENST00000511843 SDCBP2Q9H190 292 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 HEBP1Q9NRV9 189 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 CDH9Q9ULB4 789 aa14.21□□□□□ -0.13
RNF4-215ENST00000511843 HEPACAM2A8MVW5 462 aa14.2□□□□□ -0.14
RNF4-215ENST00000511843 DCNP07585 359 aaKnown RBP14.2□□□□□ -0.14
RNF4-215ENST00000511843 GNL1P36915 607 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms