RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CLCNKBP51801 687 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 FAAP100Q0VG06 881 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 PDCLQ13371 301 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 PKDCCQ504Y2 493 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 NOMO2Q5JPE7 1267 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 DENND1BQ6P3S1 775 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 DNAJC24Q6P3W2 148 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 DCLRE1AQ6PJP8 1040 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 RSRC2Q7L4I2 434 aaKnown RBP16.1■□□□□ 0.17
SCLT1-209ENST00000511426 RNF169Q8NCN4 708 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 DBF4BQ8NFT6 615 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 FEZF2Q8TBJ5 459 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 ACTRT1Q8TDG2 376 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 SENP8Q96LD8 212 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 NAP1L3Q99457 506 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-209ENST00000511426 IP6K2Q9UHH9 426 aa16.1■□□□□ 0.17
SCLT1-209ENST00000511426 TCRBV5S1A1TA0A578 114 aa16.09■□□□□ 0.17
SCLT1-209ENST00000511426 PCSK1P29120 753 aa16.09■□□□□ 0.17
SCLT1-209ENST00000511426 BCAT1P54687 386 aa16.09■□□□□ 0.17
SCLT1-209ENST00000511426 DSC1Q08554 894 aa16.09■□□□□ 0.17
SCLT1-209ENST00000511426 TMEM130Q8N3G9 435 aa16.09■□□□□ 0.17
SCLT1-209ENST00000511426 TBX21Q9UL17 535 aa16.09■□□□□ 0.17
SCLT1-209ENST00000511426 SCN1AP35498 2009 aa16.09■□□□□ 0.17
SCLT1-209ENST00000511426 M0QZQ0 153 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 KCNK3O14649 394 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 ATMINO43313 823 aaPredicted RBP16.08■□□□□ 0.17
SCLT1-209ENST00000511426 NCK2O43639 380 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 PROSCO94903 275 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 CTNNA1P35221 906 aaKnown RBP16.08■□□□□ 0.17
SCLT1-209ENST00000511426 SCNN1AP37088 669 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 SLC8A3P57103 927 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 PIGHQ14442 188 aaPredicted RBP16.08■□□□□ 0.17
SCLT1-209ENST00000511426 MESDQ14696 234 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 GPNMBQ14956 572 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 ACAP1Q15027 740 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 PTPN20Q4JDL3 420 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 PPP1R15BQ5SWA1 713 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 DSTYKQ6XUX3 929 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 ACOT1Q86TX2 421 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 RASGEF1CQ8N431 466 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 GPR161Q8N6U8 529 aaKnown RBP16.08■□□□□ 0.17
SCLT1-209ENST00000511426 NIPA2Q8N8Q9 360 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 ANKRD52Q8NB46 1076 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 B3GALNT2Q8NCR0 500 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 COG1Q8WTW3 980 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 CD101Q93033 1021 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 MRPL9Q9BYD2 267 aaKnown RBP16.08■□□□□ 0.17
SCLT1-209ENST00000511426 SYNCQ9H7C4 482 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.08■□□□□ 0.17
SCLT1-209ENST00000511426 PCDHB7Q9Y5E2 793 aa16.08■□□□□ 0.17
SCLT1-209ENST00000511426 SIGLEC16A6NMB1 481 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 ENPP3O14638 875 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 SPOPO43791 374 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 SRGAP2O75044 1071 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 B3GAT3O94766 335 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 MYCP01106 439 aaPredicted RBP16.08■□□□□ 0.16
SCLT1-209ENST00000511426 POMCP01189 267 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 TYMPP19971 482 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 COMTP21964 271 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 ACADSBP45954 432 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 AFF1P51825 1210 aaKnown RBP16.08■□□□□ 0.16
SCLT1-209ENST00000511426 TLE2Q04725 743 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 BST2Q10589 180 aaKnown RBP16.08■□□□□ 0.16
SCLT1-209ENST00000511426 PPP2R5EQ16537 467 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 GOLGA7BQ2TAP0 167 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 TRIM60Q495X7 471 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 PPP1R26Q5T8A7 1209 aaPredicted RBP16.08■□□□□ 0.16
SCLT1-209ENST00000511426 CCDC70Q6NSX1 233 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 METTL23Q86XA0 190 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 ABI1Q8IZP0 508 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 SLC35F5Q8WV83 523 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 SUSD3Q96L08 255 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 HSFY1Q96LI6 401 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 HNRNPABQ99729 332 aaKnown RBP16.08■□□□□ 0.16
SCLT1-209ENST00000511426 C11orf49Q9H6J7 331 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 CDH9Q9ULB4 789 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 PCDHA3Q9Y5H8 950 aa16.08■□□□□ 0.16
SCLT1-209ENST00000511426 TMEM191CA6NGB0 347 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 CASTOR2A6NHX0 329 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 PGRMC1O00264 195 aaKnown RBP16.07■□□□□ 0.16
SCLT1-209ENST00000511426 DDX3YO15523 660 aaKnown RBP16.07■□□□□ 0.16
SCLT1-209ENST00000511426 PSTPIP1O43586 416 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 TRAPPC3O43617 180 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 FGFR1P11362 822 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 RPL34P49207 117 aaKnown RBP16.07■□□□□ 0.16
SCLT1-209ENST00000511426 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
SCLT1-209ENST00000511426 CLLU1OSQ5K130 101 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 DCUN1D2Q6PH85 259 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 TMEM110Q86TL2 294 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 NPAS4Q8IUM7 802 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 RUBCNQ92622 972 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 MCRS1Q96EZ8 462 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 NCAPGQ9BPX3 1015 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 SLC4A5Q9BY07 1137 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 RNF19AQ9NV58 838 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 INPP5FQ9Y2H2 1132 aa16.07■□□□□ 0.16
SCLT1-209ENST00000511426 MYH10P35580 1976 aa16.06■□□□□ 0.16
SCLT1-209ENST00000511426 CARNS1A5YM72 827 aa16.06■□□□□ 0.16
SCLT1-209ENST00000511426 ZNF185O15231 689 aa16.06■□□□□ 0.16
SCLT1-209ENST00000511426 CLTBP09497 229 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms