RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 LARP1BQ659C4 914 aaKnown RBP17.17■□□□□ 0.34
RAB40C-202ENST00000509637 KBTBD6Q86V97 674 aa17.17■□□□□ 0.34
RAB40C-202ENST00000509637 PDCL2Q8N4E4 241 aa17.17■□□□□ 0.34
RAB40C-202ENST00000509637 SAAL1Q96ER3 474 aa17.17■□□□□ 0.34
RAB40C-202ENST00000509637 CYP2S1Q96SQ9 504 aa17.17■□□□□ 0.34
RAB40C-202ENST00000509637 SMOC1Q9H4F8 434 aa17.17■□□□□ 0.34
RAB40C-202ENST00000509637 SIX4Q9UIU6 781 aa17.17■□□□□ 0.34
RAB40C-202ENST00000509637 FBXO2Q9UK22 296 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-202ENST00000509637 RAB23Q9ULC3 237 aa17.17■□□□□ 0.34
RAB40C-202ENST00000509637 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-202ENST00000509637 SPAG17Q6Q759 2223 aa17.17■□□□□ 0.34
RAB40C-202ENST00000509637 ANAPC1Q9H1A4 1944 aa17.17■□□□□ 0.34
RAB40C-202ENST00000509637 GREB1Q4ZG55 1949 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 GOLGA8IPA6NC78 632 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 GOLGA8JA6NMD2 632 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 TRDMT1O14717 391 aaKnown RBP17.16■□□□□ 0.34
RAB40C-202ENST00000509637 AXIN1O15169 862 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 LRP3O75074 770 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 KRT18P05783 430 aaKnown RBP17.16■□□□□ 0.34
RAB40C-202ENST00000509637 CYP2F1P24903 491 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 CDC25CP30307 473 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 GALK1P51570 392 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 ZXDBP98169 803 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 ARHGAP15Q53QZ3 475 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 PPM1JQ5JR12 505 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 SPPL2BQ8TCT7 592 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 NETO1Q8TDF5 533 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 ARRDC1-AS1Q9H2J1 176 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 NME7Q9Y5B8 376 aa17.16■□□□□ 0.34
RAB40C-202ENST00000509637 MAP1BP46821 2468 aaKnown RBP17.16■□□□□ 0.34
RAB40C-202ENST00000509637 ATP2C2O75185 946 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 FGF19O95750 216 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 SDHBP21912 280 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 PAX3P23760 479 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 POLR2BP30876 1174 aaKnown RBP17.15■□□□□ 0.34
RAB40C-202ENST00000509637 CNR2P34972 360 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 RAP1GAPP47736 663 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 PPP2R5DQ14738 602 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 SLFN12LQ6IEE8 588 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 GLIS3Q8NEA6 775 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 POMGNT1Q8WZA1 660 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 CBWD1Q9BRT8 395 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 FAM213AQ9BRX8 229 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 GTF3C4Q9UKN8 822 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 DSEQ9UL01 958 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 AGAP1Q9UPQ3 857 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 SMC3Q9UQE7 1217 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 PCDHB5Q9Y5E4 795 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 MYO16Q9Y6X6 1858 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 PTPRJQ12913 1337 aa17.15■□□□□ 0.34
RAB40C-202ENST00000509637 TBCAO75347 108 aaKnown RBP17.14■□□□□ 0.33
RAB40C-202ENST00000509637 PRPF40AO75400 957 aaKnown RBP17.14■□□□□ 0.33
RAB40C-202ENST00000509637 ITGB3P05106 788 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 PLCB2Q00722 1185 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 VEPH1Q14D04 833 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 C1orf228Q6PIY5 440 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.14■□□□□ 0.33
RAB40C-202ENST00000509637 MON1AQ86VX9 555 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 METTL23Q86XA0 190 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 BRSK2Q8IWQ3 736 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 THEM5Q8N1Q8 247 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 SYNPOQ8N3V7 929 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 C2orf15Q8WU43 125 aaKnown RBP17.14■□□□□ 0.33
RAB40C-202ENST00000509637 LINC00597Q9H2U6 94 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 TDP1Q9NUW8 608 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 GCNT4Q9P109 453 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 MAGED2Q9UNF1 606 aaPredicted RBP17.14■□□□□ 0.33
RAB40C-202ENST00000509637 KIF3AQ9Y496 699 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 ABCA7Q8IZY2 2146 aa17.14■□□□□ 0.33
RAB40C-202ENST00000509637 GABRDO14764 452 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 DCLK1O15075 740 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 RNF40O75150 1001 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 NOL4O94818 638 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 SCP2P22307 547 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 LMO2P25791 158 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 GJA4P35212 333 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 TFAMQ00059 246 aaKnown RBP17.13■□□□□ 0.33
RAB40C-202ENST00000509637 POU5F1Q01860 360 aaKnown RBP17.13■□□□□ 0.33
RAB40C-202ENST00000509637 GAB4Q2WGN9 574 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 LMBRD2Q68DH5 695 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-202ENST00000509637 CEP68Q76N32 757 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 LIMS2Q7Z4I7 341 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 GAB3Q8WWW8 586 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 PANK2Q9BZ23 570 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 PCIF1Q9H4Z3 704 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 PDE11AQ9HCR9 933 aa17.13■□□□□ 0.33
RAB40C-202ENST00000509637 DDX43Q9NXZ2 648 aaKnown RBP17.13■□□□□ 0.33
RAB40C-202ENST00000509637 C2orf78A6NCI8 922 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 HOXD13P35453 343 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 RESTQ13127 1097 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 ZNF77Q15935 545 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 SOWAHAQ2M3V2 549 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 SV2CQ496J9 727 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 INTS6LQ5JSJ4 861 aaKnown RBP17.12■□□□□ 0.33
RAB40C-202ENST00000509637 PLA2G2CQ5R387 149 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 L1TD1Q5T7N2 865 aaKnown RBP17.12■□□□□ 0.33
RAB40C-202ENST00000509637 DCP1BQ8IZD4 617 aaKnown RBP17.12■□□□□ 0.33
RAB40C-202ENST00000509637 KRI1Q8N9T8 703 aaKnown RBP17.12■□□□□ 0.33
RAB40C-202ENST00000509637 OR5B17Q8NGF7 314 aa17.12■□□□□ 0.33
RAB40C-202ENST00000509637 LEO1Q8WVC0 666 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms