RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 YIPF1Q9Y548 306 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 SNX9Q9Y5X1 595 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 DENND4AQ7Z401 1863 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 MTMR11A4FU01 709 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 PSMA7O14818 248 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 SLC16A3O15427 465 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 PHACTR2O75167 634 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 CEBPBP17676 345 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 PSMC2P35998 433 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 GCLMP48507 274 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 TUFMP49411 452 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 VAMP7P51809 220 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 PTPN5P54829 565 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 MARSP56192 900 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 MYL6P60660 151 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 FKBP3Q00688 224 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 MYL7Q01449 175 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 APBA1Q02410 837 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 VEPH1Q14D04 833 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 IQCB1Q15051 598 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 SLC5A9Q2M3M2 681 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 ANO6Q4KMQ2 910 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 MIIPQ5JXC2 388 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 IER5LQ5T953 404 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 CDKAL1Q5VV42 579 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 ASTLQ6HA08 431 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 FILIP1Q7Z7B0 1213 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 ITIH5Q86UX2 942 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 LRRC52Q8N7C0 313 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 LEMD2Q8NC56 503 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 OR10T2Q8NGX3 314 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 LMO3Q8TAP4 145 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 GPR152Q8TDT2 470 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 KBTBD7Q8WVZ9 684 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 TCEAL4Q96EI5 215 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 HPDLQ96IR7 371 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 LPIN3Q9BQK8 851 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 PI4K2AQ9BTU6 479 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 MKNK1Q9BUB5 465 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 RPP25Q9BUL9 199 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 ZCWPW1Q9H0M4 648 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 ABI2Q9NYB9 513 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 CEP72Q9P209 647 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 WNT16Q9UBV4 365 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 AJAP1Q9UKB5 411 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 L1RE1Q9UN81 338 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 GREB1Q4ZG55 1949 aa9.37□□□□□ -0.91
PDLIM5-213ENST00000509357 NRG2O14511 850 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 CETN3O15182 167 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 SOAT2O75908 522 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 KIF20AO95235 890 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 GJA1P17302 382 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 RAP1GAPP47736 663 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 LHX1P48742 406 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 CLCN5P51795 746 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 GPC5P78333 572 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 SMARCB1Q12824 385 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 TRPC3Q13507 836 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 STX1AQ16623 288 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 TMEM86AQ8N2M4 240 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 PDCL2Q8N4E4 241 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 C2orf15Q8WU43 125 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 SHDQ96IW2 340 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 CNOT6LQ96LI5 555 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 CEP63Q96MT8 703 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 MMS19Q96T76 1030 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 CRISPLD1Q9H336 500 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 SMYD3Q9H7B4 428 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 MMRN2Q9H8L6 949 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 ZFP14Q9HCL3 533 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 AVENQ9NQS1 362 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 DDX43Q9NXZ2 648 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 ASB3Q9Y575 518 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 PCDHB5Q9Y5E4 795 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 MYO10Q9HD67 2058 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 OBSL1O75147 1896 aa9.36□□□□□ -0.91
PDLIM5-213ENST00000509357 ZDBF2Q9HCK1 2354 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 A0A1W2PRU2 124 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ECI2O75521 394 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 MICAL2O94851 1124 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 FGF19O95750 216 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 HLA-DRAP01903 254 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 EPB41P11171 864 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ATP1A3P13637 1013 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ZNF18P17022 549 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ACAT1P24752 427 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ERCC5P28715 1186 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 PCSK1P29120 753 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 CCR2P41597 374 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 CDH8P55286 799 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 TNNC1P63316 161 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 PFKPQ01813 784 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 BIRC3Q13489 604 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 TEAD2Q15562 447 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 NFE2Q16621 373 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 SOWAHAQ2M3V2 549 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ARHGAP15Q53QZ3 475 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 DCAF17Q5H9S7 520 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 FAM78AQ5JUQ0 283 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms