RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 USTQ9Y2C2 406 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 YIPF1Q9Y548 306 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 ASB3Q9Y575 518 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 CLUHO75153 1309 aa16■□□□□ 0.15
RNF4-210ENST00000508235 VNN2O95498 520 aa16■□□□□ 0.15
RNF4-210ENST00000508235 TPM2P07951 284 aa16■□□□□ 0.15
RNF4-210ENST00000508235 HAPLN1P10915 354 aaPredicted RBP16■□□□□ 0.15
RNF4-210ENST00000508235 PTPN2P17706 415 aa16■□□□□ 0.15
RNF4-210ENST00000508235 PTPN1P18031 435 aaKnown RBP16■□□□□ 0.15
RNF4-210ENST00000508235 TBXAS1P24557 533 aaPredicted RBP16■□□□□ 0.15
RNF4-210ENST00000508235 EEF1GP26641 437 aaKnown RBP16■□□□□ 0.15
RNF4-210ENST00000508235 RAP1GAPP47736 663 aa16■□□□□ 0.15
RNF4-210ENST00000508235 CDH8P55286 799 aa16■□□□□ 0.15
RNF4-210ENST00000508235 RPL10AP62906 217 aaKnown RBP16■□□□□ 0.15
RNF4-210ENST00000508235 MYL5Q02045 173 aa16■□□□□ 0.15
RNF4-210ENST00000508235 INCA1Q0VD86 236 aa16■□□□□ 0.15
RNF4-210ENST00000508235 MAN2A1Q16706 1144 aa16■□□□□ 0.15
RNF4-210ENST00000508235 C11orf57Q6ZUT1 292 aaPredicted RBP16■□□□□ 0.15
RNF4-210ENST00000508235 ITIH5Q86UX2 942 aa16■□□□□ 0.15
RNF4-210ENST00000508235 IRF2BP1Q8IU81 584 aa16■□□□□ 0.15
RNF4-210ENST00000508235 LEMD2Q8NC56 503 aa16■□□□□ 0.15
RNF4-210ENST00000508235 B3GALNT2Q8NCR0 500 aa16■□□□□ 0.15
RNF4-210ENST00000508235 MYCBPAPQ8TBZ2 947 aa16■□□□□ 0.15
RNF4-210ENST00000508235 NT5C1BQ96P26 610 aa16■□□□□ 0.15
RNF4-210ENST00000508235 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16■□□□□ 0.153e-11■■■■■ 130.3
RNF4-210ENST00000508235 SLC27A5Q9Y2P5 690 aa16■□□□□ 0.15
RNF4-210ENST00000508235 ATP8B3O60423 1300 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 MYBPHLA2RUH7 354 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 GTPBP10A4D1E9 387 aaKnown RBP15.99■□□□□ 0.15
RNF4-210ENST00000508235 KCNJ18B7U540 433 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 MAGEA11P43364 429 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 NDST1P52848 882 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 PSMC1P62191 440 aaKnown RBP15.99■□□□□ 0.15
RNF4-210ENST00000508235 CYP27A1Q02318 531 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 ZP2Q05996 745 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 KCNJ12Q14500 433 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 PABPC1LQ4VXU2 614 aaKnown RBP15.99■□□□□ 0.15
RNF4-210ENST00000508235 OTOP3Q7RTS5 596 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 GRASPQ7Z6J2 395 aaPredicted RBP15.99■□□□□ 0.15
RNF4-210ENST00000508235 PLCD3Q8N3E9 789 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 ANKRD20A12PQ8NF67 263 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 ELMO3Q96BJ8 720 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 ACSF2Q96CM8 615 aaPredicted RBP15.99■□□□□ 0.15
RNF4-210ENST00000508235 UHRF1Q96T88 793 aaPredicted RBP15.99■□□□□ 0.15
RNF4-210ENST00000508235 TUBGCP2Q9BSJ2 902 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 SDCBP2Q9H190 292 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 DNAJC25Q9H1X3 360 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 CRTAC1Q9NQ79 661 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 AVENQ9NQS1 362 aaPredicted RBP15.99■□□□□ 0.15
RNF4-210ENST00000508235 TMLHEQ9NVH6 421 aa15.99■□□□□ 0.15
RNF4-210ENST00000508235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.99■□□□□ 0.158e-7■■□□□ 12.8
RNF4-210ENST00000508235 PTPRDP23468 1912 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 ZNF197O14709 1029 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 HCRTO43612 131 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 ATP2C2O75185 946 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 FGF19O95750 216 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 FSHRP23945 695 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 SSTR3P32745 418 aaPredicted RBP15.98■□□□□ 0.15
RNF4-210ENST00000508235 TCP11X2Q5H9J9 407 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 MDH1BQ5I0G3 518 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 CYP4A22Q5TCH4 519 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 VSTM1Q6UX27 236 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 CRYBG2Q8N1P7 616 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 TTC9BQ8N6N2 239 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 TDRD5Q8NAT2 981 aaKnown RBP15.98■□□□□ 0.15
RNF4-210ENST00000508235 EHBP1Q8NDI1 1231 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 FAM200AQ8TCP9 573 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 PRUNE2Q8WUY3 3088 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 MYLPFQ96A32 169 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 PCED1BQ96HM7 432 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 RPGRIP1Q96KN7 1286 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 FAM81BQ96LP2 452 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 CEP295NLQ96MC4 621 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 BPIFA3Q9BQP9 254 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 NT5C1AQ9BXI3 368 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 CRISPLD1Q9H336 500 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 DPEP3Q9H4B8 488 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 ASAH2Q9NR71 780 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 SAMSN1Q9NSI8 373 aaKnown RBP15.98■□□□□ 0.15
RNF4-210ENST00000508235 DNMT3BQ9UBC3 853 aaKnown RBP15.98■□□□□ 0.15
RNF4-210ENST00000508235 CDH22Q9UJ99 828 aa15.98■□□□□ 0.15
RNF4-210ENST00000508235 ZFP37Q9Y6Q3 630 aaPredicted RBP15.98■□□□□ 0.15
RNF4-210ENST00000508235 SYCE3A1L190 88 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 C19orf67A6NJJ6 358 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 LOC730098B7Z3J9 87 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 TRIM66O15016 1216 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 LRRN2O75325 713 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 CILPO75339 1184 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 RHOP08100 348 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 CD58P19256 250 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 CYP2F1P24903 491 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 CUL2Q13617 745 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 TAF12Q16514 161 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 ANO6Q4KMQ2 910 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 VWA3BQ502W6 1294 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 CDKAL1Q5VV42 579 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 GBP6Q6ZN66 633 aa15.97■□□□□ 0.15
RNF4-210ENST00000508235 PDZD4Q76G19 769 aaPredicted RBP15.97■□□□□ 0.15
RNF4-210ENST00000508235 ACOT1Q86TX2 421 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms