RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 PCDHB5Q9Y5E4 795 aa21.23■□□□□ 0.99
SNX25-204ENST00000506896 CLUHO75153 1309 aa21.23■□□□□ 0.99
SNX25-204ENST00000506896 P4HA2O15460 535 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 VNN2O95498 520 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 ACAT1P24752 427 aaKnown RBP21.22■□□□□ 0.99
SNX25-204ENST00000506896 ALDH1A3P47895 512 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 FMO5P49326 533 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 STX1AQ16623 288 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 KLHL40Q2TBA0 621 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 WDR44Q5JSH3 913 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 BMP8AQ7Z5Y6 402 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 FAM114A1Q8IWE2 563 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 PKMYT1Q99640 499 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 SYT15Q9BQS2 421 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 PI4K2AQ9BTU6 479 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 NIF3L1Q9GZT8 377 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 CYP3A43Q9HB55 503 aa21.22■□□□□ 0.99
SNX25-204ENST00000506896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNX25-204ENST00000506896 LMO2P25791 158 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 ASPAP45381 313 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 TWF1Q12792 350 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 SPOPLQ6IQ16 392 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 CAVIN1Q6NZI2 390 aaKnown RBP21.21■□□□□ 0.99
SNX25-204ENST00000506896 FAM171BQ6P995 826 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 C4orf50Q6ZRC1 276 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 FUBP3Q96I24 572 aaKnown RBP eCLIP21.21■□□□□ 0.99
SNX25-204ENST00000506896 CNOT6LQ96LI5 555 aaKnown RBP21.21■□□□□ 0.99
SNX25-204ENST00000506896 BCO2Q9BYV7 579 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 FAM124BQ9H5Z6 455 aaPredicted RBP21.21■□□□□ 0.99
SNX25-204ENST00000506896 SMYD3Q9H7B4 428 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 ABI2Q9NYB9 513 aaPredicted RBP21.21■□□□□ 0.99
SNX25-204ENST00000506896 RAPGEFL1Q9UHV5 662 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 SORCS3Q9UPU3 1222 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 YIPF1Q9Y548 306 aa21.21■□□□□ 0.99
SNX25-204ENST00000506896 A8MXQ7 604 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 ASGR2P07307 311 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 EPHB3P54753 998 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 SIGLEC14Q08ET2 396 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 CFAP221Q4G0U5 840 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 IQCEQ6IPM2 695 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 SCARA5Q6ZMJ2 495 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 HFE2Q6ZVN8 426 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 GRASPQ7Z6J2 395 aaPredicted RBP21.2■□□□□ 0.98
SNX25-204ENST00000506896 TTC39CQ8N584 583 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 SEMA4DQ92854 862 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 ASIC4Q96FT7 647 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 TNIP3Q96KP6 325 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 ZNF512Q96ME7 567 aaPredicted RBP21.2■□□□□ 0.98
SNX25-204ENST00000506896 MYADMQ96S97 322 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 GTF3C4Q9UKN8 822 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 SLC27A5Q9Y2P5 690 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 ASB3Q9Y575 518 aa21.2■□□□□ 0.98
SNX25-204ENST00000506896 ZNF318Q5VUA4 2279 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 TMEM221A6NGB7 291 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 M0R296 226 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 LETM1O95202 739 aaPredicted RBP21.19■□□□□ 0.98
SNX25-204ENST00000506896 AFPP02771 609 aaKnown RBP21.19■□□□□ 0.98
SNX25-204ENST00000506896 PDGFRBP09619 1106 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 PTPN2P17706 415 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 TRIM21P19474 475 aaKnown RBP21.19■□□□□ 0.98
SNX25-204ENST00000506896 CDH8P55286 799 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 KCNH2Q12809 1159 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 MGAT5BQ3V5L5 792 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 UNC93AQ86WB7 457 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 SPATA2LQ8IUW3 424 aaPredicted RBP21.19■□□□□ 0.98
SNX25-204ENST00000506896 LEMD2Q8NC56 503 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 ENOX1Q8TC92 643 aaKnown RBP21.19■□□□□ 0.98
SNX25-204ENST00000506896 SEPT5Q99719 369 aaPredicted RBP21.19■□□□□ 0.98
SNX25-204ENST00000506896 DNAI2Q9GZS0 605 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 CRISPLD1Q9H336 500 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 APOBEC3GQ9HC16 384 aaKnown RBP21.19■□□□□ 0.98
SNX25-204ENST00000506896 AVENQ9NQS1 362 aaPredicted RBP21.19■□□□□ 0.98
SNX25-204ENST00000506896 TMLHEQ9NVH6 421 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.19■□□□□ 0.98
SNX25-204ENST00000506896 EPS15L1Q9UBC2 864 aa21.19■□□□□ 0.98
SNX25-204ENST00000506896 MAGEC2Q9UBF1 373 aaPredicted RBP21.19■□□□□ 0.98
SNX25-204ENST00000506896 MYBPHLA2RUH7 354 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 HCRTO43612 131 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 HAPLN1P10915 354 aaPredicted RBP21.18■□□□□ 0.98
SNX25-204ENST00000506896 FSHRP23945 695 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 RAP1GAPP47736 663 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 PSMC1P62191 440 aaKnown RBP21.18■□□□□ 0.98
SNX25-204ENST00000506896 INCA1Q0VD86 236 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 VEPH1Q14D04 833 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 SKOR2Q2VWA4 1001 aaPredicted RBP21.18■□□□□ 0.98
SNX25-204ENST00000506896 PABPC1LQ4VXU2 614 aaKnown RBP21.18■□□□□ 0.98
SNX25-204ENST00000506896 ITIH5Q86UX2 942 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 IRF2BP1Q8IU81 584 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 CREBRFQ8IUR6 639 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 UBALD2Q8IYN6 164 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 B3GALNT2Q8NCR0 500 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 MYCBPAPQ8TBZ2 947 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 ELMO3Q96BJ8 720 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 SDCBP2Q9H190 292 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 KCNK12Q9HB15 430 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 CRTAC1Q9NQ79 661 aa21.18■□□□□ 0.98
SNX25-204ENST00000506896 DNMT3BQ9UBC3 853 aaKnown RBP21.18■□□□□ 0.98
SNX25-204ENST00000506896 ATP2C2O75185 946 aa21.17■□□□□ 0.98
SNX25-204ENST00000506896 PRKCSHP14314 528 aaPredicted RBP21.17■□□□□ 0.98
SNX25-204ENST00000506896 PTPN1P18031 435 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms