RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 PKMYT1Q99640 499 aa12.22□□□□□ -0.45
KDM3B-203ENST00000505756 SEPT5Q99719 369 aaPredicted RBP12.22□□□□□ -0.45
KDM3B-203ENST00000505756 TSG101Q99816 390 aa12.22□□□□□ -0.45
KDM3B-203ENST00000505756 MKNK1Q9BUB5 465 aa12.22□□□□□ -0.45
KDM3B-203ENST00000505756 XYLT2Q9H1B5 865 aa12.22□□□□□ -0.45
KDM3B-203ENST00000505756 RBSNQ9H1K0 784 aa12.22□□□□□ -0.45
KDM3B-203ENST00000505756 VRTNQ9H8Y1 702 aa12.22□□□□□ -0.45
KDM3B-203ENST00000505756 CBX8Q9HC52 389 aa12.22□□□□□ -0.45
KDM3B-203ENST00000505756 ABI2Q9NYB9 513 aaPredicted RBP12.22□□□□□ -0.45
KDM3B-203ENST00000505756 DUSP12Q9UNI6 340 aa12.22□□□□□ -0.45
KDM3B-203ENST00000505756 PCDHB5Q9Y5E4 795 aa12.22□□□□□ -0.45
KDM3B-203ENST00000505756 NUMBLQ9Y6R0 609 aa12.22□□□□□ -0.45
KDM3B-203ENST00000505756 CETN3O15182 167 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 SOAT2O75908 522 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 FGF19O95750 216 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 HAPLN1P10915 354 aaPredicted RBP12.21□□□□□ -0.45
KDM3B-203ENST00000505756 MYL4P12829 197 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 CD44P16070 742 aaKnown RBP12.21□□□□□ -0.45
KDM3B-203ENST00000505756 CEBPBP17676 345 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 CCR2P41597 374 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 MRE11P49959 708 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 LRRC63Q05C16 580 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 VEPH1Q14D04 833 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 NCAPHQ15003 741 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 ZNF699Q32M78 642 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 PARM1Q6UWI2 310 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 HFE2Q6ZVN8 426 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 SV2AQ7L0J3 742 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 DHX40Q8IX18 779 aaKnown RBP12.21□□□□□ -0.45
KDM3B-203ENST00000505756 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 SLC44A3Q8N4M1 653 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 ENOX1Q8TC92 643 aaKnown RBP12.21□□□□□ -0.45
KDM3B-203ENST00000505756 RSAD2Q8WXG1 361 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 ING5Q8WYH8 240 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 DHTKD1Q96HY7 919 aaPredicted RBP12.21□□□□□ -0.45
KDM3B-203ENST00000505756 LRRC3Q9BY71 257 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 SMOC2Q9H3U7 446 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 ABCB6Q9NP58 842 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 TMLHEQ9NVH6 421 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 GTF3C4Q9UKN8 822 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 CDH9Q9ULB4 789 aa12.21□□□□□ -0.45
KDM3B-203ENST00000505756 NOTCH4Q99466 2003 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 PSMA7O14818 248 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 HCRTO43612 131 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 CLSTN1O94985 981 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 VNN1O95497 513 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 EPB41P11171 864 aaKnown RBP12.2□□□□□ -0.46
KDM3B-203ENST00000505756 SRFP11831 508 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 ATF6P18850 670 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 LMO2P25791 158 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 GNL1P36915 607 aaPredicted RBP12.2□□□□□ -0.46
KDM3B-203ENST00000505756 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
KDM3B-203ENST00000505756 FKBP3Q00688 224 aaKnown RBP12.2□□□□□ -0.46
KDM3B-203ENST00000505756 MYL5Q02045 173 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 MAPRE1Q15691 268 aaKnown RBP12.2□□□□□ -0.46
KDM3B-203ENST00000505756 SGSM1Q2NKQ1 1148 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 CFAP221Q4G0U5 840 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 ZNF667Q5HYK9 610 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 C1orf220Q5T0J3 134 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 ANKRD40Q6AI12 368 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 FAM171BQ6P995 826 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 C4orf50Q6ZRC1 276 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 DNAJB7Q7Z6W7 309 aaPredicted RBP12.2□□□□□ -0.46
KDM3B-203ENST00000505756 TMC8Q8IU68 726 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 ZC3H3Q8IXZ2 948 aaKnown RBP12.2□□□□□ -0.46
KDM3B-203ENST00000505756 TAF4BQ92750 862 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 FGF14Q92915 247 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 PBXIP1Q96AQ6 731 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 TCEAL4Q96EI5 215 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 MCRS1Q96EZ8 462 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 FUBP3Q96I24 572 aaKnown RBP eCLIP12.2□□□□□ -0.46
KDM3B-203ENST00000505756 MED15Q96RN5 788 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 LPIN3Q9BQK8 851 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 SYT15Q9BQS2 421 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 MRPL45Q9BRJ2 306 aaKnown RBP12.2□□□□□ -0.46
KDM3B-203ENST00000505756 PI4K2AQ9BTU6 479 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 SNX25Q9H3E2 840 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 GRPEL1Q9HAV7 217 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
KDM3B-203ENST00000505756 RWDD2AQ9UIY3 292 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 DOCK8Q8NF50 2099 aa12.2□□□□□ -0.46
KDM3B-203ENST00000505756 MYBPHLA2RUH7 354 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 SLC16A3O15427 465 aaKnown RBP12.19□□□□□ -0.46
KDM3B-203ENST00000505756 STX10O60499 249 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 MOSPD3O75425 235 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 TRIM49P0CI25 452 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 TRIM49CP0CI26 452 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 P4HA1P13674 534 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 COL9A1P20849 921 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 CCNE1P24864 410 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 GTF2H1P32780 548 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 PIK3CAP42336 1068 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 CDR1P51861 262 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 PSMC1P62191 440 aaKnown RBP12.19□□□□□ -0.46
KDM3B-203ENST00000505756 RPL10AP62906 217 aaKnown RBP12.19□□□□□ -0.46
KDM3B-203ENST00000505756 PAK1Q13153 545 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 ISM2Q6H9L7 571 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 SPATA2LQ8IUW3 424 aaPredicted RBP12.19□□□□□ -0.46
KDM3B-203ENST00000505756 OR6B3Q8NGW1 331 aa12.19□□□□□ -0.46
KDM3B-203ENST00000505756 SHKBP1Q8TBC3 707 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms