RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TRIM31Q9BZY9 425 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 PABPC3Q9H361 631 aaKnown RBP18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 TMBIM4Q9HC24 238 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 USTQ9Y2C2 406 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 NFS1Q9Y697 457 aa18.25■□□□□ 0.51
TRAPPC11-204ENST00000505676 TCRBV7S2A1N4TA0A589 114 aa18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 CAPN2P17655 700 aa18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 CYP3A5P20815 502 aa18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 RPL21P46778 160 aaKnown RBP18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 RAP1GAPP47736 663 aa18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 PSMC1P62191 440 aaKnown RBP18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 UAP1Q16222 522 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 CEP85LQ5SZL2 805 aa18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 ALKAL1Q6UXT8 129 aa18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 MCRS1Q96EZ8 462 aa18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 SNF8Q96H20 258 aa18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 ZNF560Q96MR9 790 aa18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 CITO14578 2027 aa18.24■□□□□ 0.51
TRAPPC11-204ENST00000505676 KRT1P04264 644 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 FAM163BP0C2L3 166 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 DESP17661 470 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 ACTN2P35609 894 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 PMS2P54278 862 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 PLTPP55058 493 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 KRT17Q04695 432 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 TTMPQ5BVD1 217 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 LLGL2Q6P1M3 1020 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 PHLDB2Q86SQ0 1253 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 SAPCD2Q86UD0 394 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 HEXIM2Q96MH2 286 aaKnown RBP18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 SLITRK1Q96PX8 696 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 FLRT1Q9NZU1 646 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 GJD2Q9UKL4 321 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 M0QYV0 167 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 TNPO2O14787 897 aaKnown RBP18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 DUSP11O75319 330 aaKnown RBP18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 IVLP07476 585 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 MYL3P08590 195 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 RARGP13631 454 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 PSMA2P25787 234 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 GYS2P54840 703 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 CDH8P55286 799 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 PDCLQ13371 301 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 SNX17Q15036 470 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 XKR4Q5GH76 650 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 TFDP3Q5H9I0 405 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 KDM7AQ6ZMT4 941 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 TRMT10CQ7L0Y3 403 aaKnown RBP18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 XYLT1Q86Y38 959 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 TTC13Q8NBP0 860 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 FBXO25Q8TCJ0 367 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 OSMRQ99650 979 aa18.23■□□□□ 0.51
TRAPPC11-204ENST00000505676 KRT14P02533 472 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 KCNE1P15382 129 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 SSTR3P32745 418 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 GPD2P43304 727 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 NDST1P52848 882 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 ZNF252P-AS1Q0IIN9 211 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 FSCN1Q16658 493 aaKnown RBP18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 PRAMEF19Q5SWL8 479 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 DENND2CQ68D51 928 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 ZDHHC17Q8IUH5 632 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 STK32AQ8WU08 396 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 SNTG2Q9NY99 539 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 DRG1Q9Y295 367 aaKnown RBP18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 MGAMO43451 1857 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 PCK1P35558 622 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 ZNF844Q08AG5 666 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 ZNF365Q70YC5 407 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 C1orf54Q8WWF1 131 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 ARL8AQ96BM9 186 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 TMEM109Q9BVC6 243 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 TRAIPQ9BWF2 469 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 CYLDQ9NQC7 956 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 ASNSD1Q9NWL6 643 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 ASIC3Q9UHC3 531 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 ATP8A1Q9Y2Q0 1164 aa18.22■□□□□ 0.51
TRAPPC11-204ENST00000505676 SRRM3A6NNA2 597 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC11-204ENST00000505676 ATF2P15336 505 aa18.21■□□□□ 0.51
TRAPPC11-204ENST00000505676 CYP2B6P20813 491 aa18.21■□□□□ 0.51
TRAPPC11-204ENST00000505676 NKX3-2P78367 333 aa18.21■□□□□ 0.51
TRAPPC11-204ENST00000505676 SPOCD1Q6ZMY3 1216 aa18.21■□□□□ 0.51
TRAPPC11-204ENST00000505676 C7orf31Q8N865 590 aa18.21■□□□□ 0.51
TRAPPC11-204ENST00000505676 TWNKQ96RR1 684 aa18.21■□□□□ 0.51
TRAPPC11-204ENST00000505676 CWC15Q9P013 229 aaKnown RBP18.21■□□□□ 0.51
TRAPPC11-204ENST00000505676 RNF8O76064 485 aa18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 CDR1P51861 262 aa18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 PURAQ00577 322 aaKnown RBP18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 IFFO1Q0D2I5 559 aa18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 ZFYVE27Q5T4F4 411 aa18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 ARHGAP17Q68EM7 881 aa18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 RSPH3Q86UC2 560 aa18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 DNAJB3Q8WWF6 145 aa18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 CPXM1Q96SM3 734 aa18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 STMN4Q9H169 189 aaPredicted RBP18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 CHST7Q9NS84 486 aa18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 PTPN22Q9Y2R2 807 aa18.21■□□□□ 0.5
TRAPPC11-204ENST00000505676 F8VP50 259 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 M0QZ92 97 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 RECQL4O94761 1208 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms