RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 EXOC8Q8IYI6 725 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 Q8N3U1 123 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 DAGLBQ8NCG7 672 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 MDM1Q8TC05 714 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 RUFY2Q8WXA3 655 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 CRELD1Q96HD1 420 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 PPP1R10Q96QC0 940 aaKnown RBP7.7□□□□□ -1.18
VCAN-206ENST00000505615 NFKBIZQ9BYH8 718 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 GPR88Q9GZN0 384 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 DNAJC25Q9H1X3 360 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 SLC32A1Q9H598 525 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 SLITRK6Q9H5Y7 841 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 CCDC86Q9H6F5 360 aaKnown RBP7.7□□□□□ -1.18
VCAN-206ENST00000505615 GOLGA2P5Q9HBQ8 144 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 ASAH2Q9NR71 780 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 OBP2AQ9NY56 170 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 EBF1Q9UH73 591 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 VAV3Q9UKW4 847 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 MYOFQ9NZM1 2061 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 CYP3A7-CYP3A51PA0A087WV96 503 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 OTOL1A6NHN0 477 aaPredicted RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 GOLGA8AA7E2F4 631 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 GOLGA8BA8MQT2 603 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 TRDMT1O14717 391 aaKnown RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 SLC27A2O14975 620 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 ZBTB43O43298 467 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 ATG13O75143 517 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 APBB3O95704 486 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 GLRA2P23416 452 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 CYP3A7P24462 503 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 GBP1P32455 592 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 CLCNKBP51801 687 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 PPP2R5CQ13362 524 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 MRPL58Q14197 206 aaKnown RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 MXD4Q14582 209 aaPredicted RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 LBRQ14739 615 aaKnown RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 UPP1Q16831 310 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 ZNF423Q2M1K9 1284 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 ITPRIPL2Q3MIP1 535 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 LARP1BQ659C4 914 aaKnown RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 TPGS2Q68CL5 300 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 NAIF1Q69YI7 327 aaPredicted RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 IQCEQ6IPM2 695 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 CCNI2Q6ZMN8 369 aaPredicted RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 C4orf19Q8IY42 314 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 ELMOD1Q8N336 334 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 EZH1Q92800 747 aaPredicted RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 ZNF512Q96ME7 567 aaPredicted RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 PDZD7Q9H5P4 517 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 FBRSL1Q9HCM7 1045 aaKnown RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 HPS4Q9NQG7 708 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 AFF4Q9UHB7 1163 aaKnown RBP7.69□□□□□ -1.18
VCAN-206ENST00000505615 FBXL5Q9UKA1 691 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 INVSQ9Y283 1065 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 YIPF1Q9Y548 306 aa7.69□□□□□ -1.18
VCAN-206ENST00000505615 COL12A1Q99715 3063 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 ANAPC1Q9H1A4 1944 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 A0A1B0GTH6 734 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 SLC37A4O43826 429 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 IL2RAP01589 272 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 EDN1P05305 212 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 P4HBP07237 508 aaKnown RBP7.68□□□□□ -1.18
VCAN-206ENST00000505615 ENGP17813 658 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 GNA11P29992 359 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 YWHABP31946 246 aaKnown RBP7.68□□□□□ -1.18
VCAN-206ENST00000505615 ARL2P36404 184 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 MAPK8P45983 427 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 ARPP19P56211 112 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 SOX4Q06945 474 aaPredicted RBP7.68□□□□□ -1.18
VCAN-206ENST00000505615 NCBP1Q09161 790 aaKnown RBP7.68□□□□□ -1.18
VCAN-206ENST00000505615 KCNA1Q09470 495 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 GRSF1Q12849 480 aaKnown RBP eCLIP7.68□□□□□ -1.18
VCAN-206ENST00000505615 LMAN2Q12907 356 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 TFDP1Q14186 410 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 DMC1Q14565 340 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 TRIM61Q5EBN2 209 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 GLRA4Q5JXX5 417 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 TTC22Q5TAA0 569 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 LINC00114Q6XXX2 140 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 SYNE3Q6ZMZ3 975 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 GAREM2Q75VX8 874 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 SYT13Q7L8C5 426 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 HAUS6Q7Z4H7 955 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 BEST2Q8NFU1 509 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 BPIFB1Q8TDL5 484 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 TBCKQ8TEA7 893 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 CCDC12Q8WUD4 166 aaPredicted RBP7.68□□□□□ -1.18
VCAN-206ENST00000505615 ADAMTS14Q8WXS8 1223 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 PIGKQ92643 395 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 TCEANC2Q96MN5 208 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 LXNQ9BS40 222 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 ESYT1Q9BSJ8 1104 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 POLR3CQ9BUI4 534 aaPredicted RBP7.68□□□□□ -1.18
VCAN-206ENST00000505615 CRISPLD1Q9H336 500 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 MUC22E2RYF6 1773 aaPredicted RBP7.68□□□□□ -1.18
VCAN-206ENST00000505615 TSC2P49815 1807 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 TEX15Q9BXT5 2789 aa7.68□□□□□ -1.18
VCAN-206ENST00000505615 TEP1Q99973 2627 aaKnown RBP7.67□□□□□ -1.18
VCAN-206ENST00000505615 SYN3O14994 580 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 DKC1O60832 514 aaKnown RBP eCLIP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms