RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 C2CD2Q9Y426 696 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 NEUROG3Q9Y4Z2 214 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 ASPMQ8IZT6 3477 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 COL4A2P08572 1712 aa10.7□□□□□ -0.7
NEDD9-210ENST00000505589 MAP3K13O43283 966 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 PRAMEF12O95522 483 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 NFATC1O95644 943 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 CDC25AP30304 524 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 NEK4P51957 841 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 ATXN3P54252 364 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-210ENST00000505589 NCKAP1LP55160 1127 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 MRPS21P82921 87 aaKnown RBP10.69□□□□□ -0.7
NEDD9-210ENST00000505589 SPAG1Q07617 926 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 SV2CQ496J9 727 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 SEZ6Q53EL9 994 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 PMS2CLQ68D20 193 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 LPCAT2Q7L5N7 544 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 CYP2U1Q7Z449 544 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 RABEPKQ7Z6M1 372 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 HDDC3Q8N4P3 179 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 CEP76Q8TAP6 659 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 GIPC2Q8TF65 315 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 USP13Q92995 863 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-210ENST00000505589 CEP295NLQ96MC4 621 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 HHIPQ96QV1 700 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 LPIN3Q9BQK8 851 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 MSTO1Q9BUK6 570 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 SCNM1Q9BWG6 230 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 CCSER1Q9C0I3 900 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 TMEM206Q9H813 350 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 IL21Q9HBE4 155 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 POLMQ9NP87 494 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-210ENST00000505589 KIF3AQ9Y496 699 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 SPAG17Q6Q759 2223 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 SDK1Q7Z5N4 2213 aa10.69□□□□□ -0.7
NEDD9-210ENST00000505589 CHD8Q9HCK8 2581 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 TRAV19A0A0A6YYK7 116 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 LNP1A1A4G5 178 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 ANO9A1A5B4 782 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 MYMKA6NI61 221 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 KPNA7A9QM74 516 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 UPK3BL1B0FP48 263 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 UPK3BL2E5RIL1 263 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 ZBTB24O43167 697 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-210ENST00000505589 JAK2O60674 1132 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 PRPF40AO75400 957 aaKnown RBP10.68□□□□□ -0.7
NEDD9-210ENST00000505589 PIGRP01833 764 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 HOXD12P35452 270 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 FOSBP53539 338 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 MYL7Q01449 175 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 GUCY1B3Q02153 619 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 MAPK7Q13164 816 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 MTF1Q14872 753 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 TMEM132DQ14C87 1099 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 POSTNQ15063 836 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 HYIQ5T013 277 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 TRIM68Q6AZZ1 485 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 PKN3Q6P5Z2 889 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 SPATA18Q8TC71 538 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 CACTINQ8WUQ7 758 aaKnown RBP10.68□□□□□ -0.7
NEDD9-210ENST00000505589 TRMT2BQ96GJ1 504 aaKnown RBP10.68□□□□□ -0.7
NEDD9-210ENST00000505589 CNOT6LQ96LI5 555 aaKnown RBP10.68□□□□□ -0.7
NEDD9-210ENST00000505589 MYRFLQ96LU7 910 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 ZNF560Q96MR9 790 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 ACBD6Q9BR61 282 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 RUSC1Q9BVN2 902 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 SMOC1Q9H4F8 434 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 ABCB6Q9NP58 842 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 CPSF3Q9UKF6 684 aaKnown RBP10.68□□□□□ -0.7
NEDD9-210ENST00000505589 MAGED2Q9UNF1 606 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-210ENST00000505589 MSRB2Q9Y3D2 182 aa10.68□□□□□ -0.7
NEDD9-210ENST00000505589 R3HCC1Q9Y3T6 440 aaKnown RBP10.68□□□□□ -0.7
NEDD9-210ENST00000505589 A0A0B4J269 797 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 SRRM3A6NNA2 597 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 CDX4O14627 284 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 SLC9A3R1O14745 358 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 TNFRSF10BO14763 440 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 SOAT2O75908 522 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 CKMP06732 381 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 PLA2G4BP0C869 781 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 TCF3P15923 654 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 ATF6P18850 670 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 U2AF2P26368 475 aaKnown RBP eCLIP10.67□□□□□ -0.73e-7■□□□□ 8.8
NEDD9-210ENST00000505589 PPP3CCP48454 512 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 DHPSP49366 369 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 ZRSR1Q15695 479 aaKnown RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 ENOX2Q16206 610 aaKnown RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 UAP1L1Q3KQV9 507 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 RILPL1Q5EBL4 403 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 EOGTQ5NDL2 527 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 TXNDC8Q6A555 127 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 JADE1Q6IE81 842 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 RASSF3Q86WH2 238 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 SYT12Q8IV01 421 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 TMEM86AQ8N2M4 240 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 MYCT1Q8N699 235 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 OR10T2Q8NGX3 314 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 LEO1Q8WVC0 666 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 CALML4Q96GE6 196 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 ZSCAN31Q96LW9 406 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms