RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 PROSER1Q86XN7 944 aa12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 THEM5Q8N1Q8 247 aa12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 CCDC26Q8TAB7 109 aa12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 OSCP1Q8WVF1 389 aa12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 RLN3Q8WXF3 142 aa12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 MRPS31Q92665 395 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 KCNG1Q9UIX4 513 aa12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 PKD1L2Q7Z442 2459 aa12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 EML5Q05BV3 1969 aa12.52□□□□□ -0.41
CCHCR1-219ENST00000505392 KIF26AQ9ULI4 1882 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 FAM221BA6H8Z2 402 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 H0Y626 953 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 TRIM16O95361 564 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 SEC24BO95487 1268 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 CAPNS1P04632 268 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 CYP11A1P05108 521 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 ENGP17813 658 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.416e-7■□□□□ 9.4
CCHCR1-219ENST00000505392 SMTNP53814 917 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 SEC13P55735 322 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 GUCY1B3Q02153 619 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 NR1H3Q13133 447 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 SEMA3BQ13214 749 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 PDIA5Q14554 519 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 ZNF268Q14587 947 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 ME3Q16798 604 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 SPATA1Q5VX52 437 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 ARMCX6Q7L4S7 300 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 LPCAT2Q7L5N7 544 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 PIP4P1Q86T03 277 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 METTL23Q86XA0 190 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 SYT12Q8IV01 421 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 TMEFF1Q8IYR6 380 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 CCDC33Q8N5R6 958 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 FRMD1Q8N878 549 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 TMEM161BQ8NDZ6 487 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 NSUN7Q8NE18 718 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 MDGA1Q8NFP4 955 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 SPPL2BQ8TCT7 592 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 SNX29Q8TEQ0 813 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 USP33Q8TEY7 942 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 C2orf15Q8WU43 125 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 CNOT6LQ96LI5 555 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 CYP2S1Q96SQ9 504 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 LINC00597Q9H2U6 94 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 RPF1Q9H9Y2 349 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 ABI2Q9NYB9 513 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 GPSM3Q9Y4H4 160 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 WNT6Q9Y6F9 365 aa12.51□□□□□ -0.41
CCHCR1-219ENST00000505392 K7EQS6 105 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 PIRO00625 290 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 CYB561D2O14569 222 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 TNFRSF10BO14763 440 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 JAK2O60674 1132 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 MAPTP10636 758 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 PLS3P13797 630 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 PAX3P23760 479 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 PTGER3P43115 390 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 IFNAR2P48551 515 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 GPR15P49685 360 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 ATXN3P54252 364 aaPredicted RBP12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 FAM193AP78312 1265 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 FAM160A1Q05DH4 1040 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 RAD51AP2Q09MP3 1159 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 SMARCB1Q12824 385 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 ANKRD1Q15327 319 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 ENOX2Q16206 610 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 CRY1Q16526 586 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 EML3Q32P44 896 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 C9orf57Q5W0N0 161 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 PDZD3Q86UT5 571 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 HDDC3Q8N4P3 179 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 C4orf32Q8N8J7 132 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 STKLD1Q8NE28 680 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 SPIRE2Q8WWL2 714 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 ATP2A3Q93084 1043 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 BICD1Q96G01 975 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 FNBP1Q96RU3 617 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 TSPAN18Q96SJ8 248 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 MBD1Q9UIS9 605 aaPredicted RBP12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 DSEQ9UL01 958 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
CCHCR1-219ENST00000505392 UPK3BL1B0FP48 263 aa12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 UPK3BL2E5RIL1 263 aa12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 PRPF40AO75400 957 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 ALDH1A2O94788 518 aa12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 ZIC2O95409 532 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 ADRB2P07550 413 aa12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 CSH1P0DML2 217 aa12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 CSH2P0DML3 217 aa12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 CDC25AP30304 524 aa12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 P2RY2P41231 377 aa12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 SCAPQ12770 1279 aa12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 ORC2Q13416 577 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 TTC38Q5R3I4 469 aa12.49□□□□□ -0.41
CCHCR1-219ENST00000505392 SDHAF4Q5VUM1 108 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms