RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 FAM109AQ8N4B1 249 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 ZCRB1Q8TBF4 217 aaKnown RBP4.56□□□□□ -1.68
GYPB-203ENST00000503255 NSUN6Q8TEA1 469 aaKnown RBP4.56□□□□□ -1.68
GYPB-203ENST00000503255 ATRIPQ8WXE1 791 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 BRIP1Q9BX63 1249 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 PRSS22Q9GZN4 317 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 SLC5A4Q9NY91 659 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 PCDHA3Q9Y5H8 950 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 LOC105371045A0A1W2PR82 267 aa4.55□□□□□ -1.68
GYPB-203ENST00000503255 SMARCA1P28370 1054 aa4.55□□□□□ -1.68
GYPB-203ENST00000503255 GCLCP48506 637 aaPredicted RBP4.55□□□□□ -1.68
GYPB-203ENST00000503255 DAZAP2Q15038 168 aaPredicted RBP4.55□□□□□ -1.68
GYPB-203ENST00000503255 LRRC41Q15345 812 aa4.55□□□□□ -1.68
GYPB-203ENST00000503255 UAP1L1Q3KQV9 507 aa4.55□□□□□ -1.68
GYPB-203ENST00000503255 CRELD2Q6UXH1 353 aaPredicted RBP4.55□□□□□ -1.68
GYPB-203ENST00000503255 USP37Q86T82 979 aa4.55□□□□□ -1.68
GYPB-203ENST00000503255 CNPPD1Q9BV87 410 aa4.55□□□□□ -1.68
GYPB-203ENST00000503255 CCDC8Q9H0W5 538 aaPredicted RBP4.55□□□□□ -1.68
GYPB-203ENST00000503255 GPR35Q9HC97 309 aa4.55□□□□□ -1.68
GYPB-203ENST00000503255 MTMR4Q9NYA4 1195 aa4.55□□□□□ -1.68
GYPB-203ENST00000503255 SERTAD3Q9UJW9 196 aa4.55□□□□□ -1.68
GYPB-203ENST00000503255 SBNO2Q9Y2G9 1366 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 FNDC1Q4ZHG4 1894 aaPredicted RBP4.54□□□□□ -1.68
GYPB-203ENST00000503255 ANKRD62A6NC57 917 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 PDE8BO95263 885 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 GNAI3P08754 354 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 MYBL2P10244 700 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 TKTP29401 623 aaKnown RBP4.54□□□□□ -1.68
GYPB-203ENST00000503255 CYP2C19P33261 490 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 ZNF134P52741 427 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 GNAI1P63096 354 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 ABCB5Q2M3G0 1257 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 AARS2Q5JTZ9 985 aaKnown RBP4.54□□□□□ -1.68
GYPB-203ENST00000503255 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
GYPB-203ENST00000503255 CYP2W1Q8TAV3 490 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 TBC1D5Q92609 795 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 TNPO1Q92973 898 aaKnown RBP4.54□□□□□ -1.68
GYPB-203ENST00000503255 TEKT5Q96M29 485 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 TINAGL1Q9GZM7 467 aaPredicted RBP4.54□□□□□ -1.68
GYPB-203ENST00000503255 DUSP22Q9NRW4 184 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 CFAP97Q9P2B7 532 aa4.54□□□□□ -1.68
GYPB-203ENST00000503255 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.54□□□□□ -1.68
GYPB-203ENST00000503255 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 M0QYG6 137 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 ADAMTS3O15072 1205 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 NXPH3O95157 252 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 FESP07332 822 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 IL6RP08887 468 aaPredicted RBP4.53□□□□□ -1.68
GYPB-203ENST00000503255 VIL1P09327 827 aaKnown RBP4.53□□□□□ -1.68
GYPB-203ENST00000503255 IBSPP21815 317 aaPredicted RBP4.53□□□□□ -1.68
GYPB-203ENST00000503255 PRDX5P30044 214 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 CCKBRP32239 447 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 PDE1AP54750 535 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 ODF1Q14990 250 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 Q4G0T1 1027 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 ZNF618Q5T7W0 954 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 PPP4R3AQ6IN85 833 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 ANKRD16Q6P6B7 361 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 DTX2Q86UW9 622 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 DDX42Q86XP3 938 aaKnown RBP eCLIP4.53□□□□□ -1.68
GYPB-203ENST00000503255 FAM46DQ8NEK8 389 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 TTYH3Q9C0H2 523 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 MAN1C1Q9NR34 630 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 SIDT1Q9NXL6 827 aaKnown RBP4.53□□□□□ -1.68
GYPB-203ENST00000503255 KLHL13Q9P2N7 655 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 ZNF580Q9UK33 172 aa4.53□□□□□ -1.68
GYPB-203ENST00000503255 MYO1FO00160 1098 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 SNHG28P0DPA3 235 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 RARBP10826 455 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 PIK3CGP48736 1102 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 POLGP54098 1239 aaPredicted RBP4.52□□□□□ -1.69
GYPB-203ENST00000503255 LINC00205P59089 165 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 HOXA4Q00056 320 aaPredicted RBP4.52□□□□□ -1.69
GYPB-203ENST00000503255 FCRL6Q6DN72 434 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 PPP1R32Q7Z5V6 425 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 TTC7BQ86TV6 843 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 FAM90A1Q86YD7 464 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 GALNT16Q8N428 558 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 LRRC71Q8N4P6 559 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 C8orf58Q8NAV2 365 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 HMCESQ96FZ2 354 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 ASB2Q96Q27 587 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 TUBA8Q9NY65 449 aaPredicted RBP4.52□□□□□ -1.69
GYPB-203ENST00000503255 MCM8Q9UJA3 840 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 SSX2IPQ9Y2D8 614 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 AFG3L2Q9Y4W6 797 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 LRP12Q9Y561 859 aa4.52□□□□□ -1.69
GYPB-203ENST00000503255 CYP2D7A0A087X1C5 515 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 H3BNC9 293 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 FZD9O00144 591 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 DCLK1O15075 740 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 SLC16A3O15427 465 aaKnown RBP4.51□□□□□ -1.69
GYPB-203ENST00000503255 CHEK2O96017 543 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 AHSGP02765 367 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 KIF22Q14807 665 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 MIS18BP1Q6P0N0 1132 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 IRF2BP2Q7Z5L9 587 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 SAMD14Q8IZD0 417 aaPredicted RBP4.51□□□□□ -1.69
GYPB-203ENST00000503255 NANOGP1Q8N7R0 232 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 NRACQ8N912 160 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms