RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
PDE4D-209ENST00000502575 SSX2IPQ9Y2D8 614 aa9.55□□□□□ -0.88
PDE4D-209ENST00000502575 KIAA1549LQ6ZVL6 1849 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 SPAG17Q6Q759 2223 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 J3QW42 95 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 PROZP22891 400 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 TKTP29401 623 aaKnown RBP9.54□□□□□ -0.88
PDE4D-209ENST00000502575 BRCC3P46736 316 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 NTHL1P78549 312 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 DMP1Q13316 513 aaPredicted RBP9.54□□□□□ -0.88
PDE4D-209ENST00000502575 TMEM119Q4V9L6 283 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 ARSHQ5FYA8 562 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 GET4Q7L5D6 327 aaPredicted RBP9.54□□□□□ -0.88
PDE4D-209ENST00000502575 IL22RA1Q8N6P7 574 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 TMEM105Q8N8V8 129 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 C18orf25Q96B23 403 aaPredicted RBP9.54□□□□□ -0.88
PDE4D-209ENST00000502575 SNX27Q96L92 541 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 DRC1Q96MC2 740 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 TTPALQ9BTX7 342 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 MRPL4Q9BYD3 311 aaKnown RBP9.54□□□□□ -0.88
PDE4D-209ENST00000502575 NT5C3AQ9H0P0 336 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 KCNK12Q9HB15 430 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 WDR6Q9NNW5 1121 aaKnown RBP9.54□□□□□ -0.88
PDE4D-209ENST00000502575 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDE4D-209ENST00000502575 FNIP2Q9P278 1114 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 ANKFY1Q9P2R3 1169 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 FBXW11Q9UKB1 542 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 SMC3Q9UQE7 1217 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 KIF3AQ9Y496 699 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 CEP250Q9BV73 2442 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 OTOGLQ3ZCN5 2332 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 EML5Q05BV3 1969 aa9.54□□□□□ -0.88
PDE4D-209ENST00000502575 SMIM28A0A1B0GU29 152 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 SMNDC1O75940 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDE4D-209ENST00000502575 PAPLNO95428 1278 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 PLA2G4BP0C869 781 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 GUCY2CP25092 1073 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 AVPR2P30518 371 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 GBP2P32456 591 aaPredicted RBP9.53□□□□□ -0.88
PDE4D-209ENST00000502575 MRE11P49959 708 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 SPAG1Q07617 926 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 DHX8Q14562 1220 aaKnown RBP9.53□□□□□ -0.88
PDE4D-209ENST00000502575 NAA30Q147X3 362 aaPredicted RBP9.53□□□□□ -0.88
PDE4D-209ENST00000502575 UPP1Q16831 310 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 LARP1BQ659C4 914 aaKnown RBP9.53□□□□□ -0.88
PDE4D-209ENST00000502575 CWF19L1Q69YN2 538 aaKnown RBP9.53□□□□□ -0.88
PDE4D-209ENST00000502575 MPZL3Q6UWV2 235 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 ALKAL1Q6UXT8 129 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 OTOP3Q7RTS5 596 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 UBALD2Q8IYN6 164 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 SYT2Q8N9I0 419 aaPredicted RBP9.53□□□□□ -0.88
PDE4D-209ENST00000502575 TMEM161BQ8NDZ6 487 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 ACSF2Q96CM8 615 aaPredicted RBP9.53□□□□□ -0.88
PDE4D-209ENST00000502575 REEP2Q9BRK0 252 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 KCNH6Q9H252 994 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 ABI2Q9NYB9 513 aaPredicted RBP9.53□□□□□ -0.88
PDE4D-209ENST00000502575 TUBGCP4Q9UGJ1 667 aa9.53□□□□□ -0.88
PDE4D-209ENST00000502575 MYOFQ9NZM1 2061 aa9.52□□□□□ -0.88
PDE4D-209ENST00000502575 VPS37CA5D8V6 355 aaPredicted RBP9.52□□□□□ -0.89
PDE4D-209ENST00000502575 TMEM189-UBE2V1I3L0A0 370 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 CCL16O15467 120 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 B3GAT3O94766 335 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 C8AP07357 584 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 MCF2P10911 925 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 PLS3P13797 630 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 PCSK2P16519 638 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 NOS3P29474 1203 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 OR1D2P34982 312 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 TDGQ13569 410 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 KARSQ15046 597 aaKnown RBP9.52□□□□□ -0.89
PDE4D-209ENST00000502575 XKR4Q5GH76 650 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 ZBTB41Q5SVQ8 909 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 FAM173BQ6P4H8 233 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.52□□□□□ -0.89
PDE4D-209ENST00000502575 GRASPQ7Z6J2 395 aaPredicted RBP9.52□□□□□ -0.89
PDE4D-209ENST00000502575 GPR65Q8IYL9 337 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 SLC7A14Q8TBB6 771 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 HDAC7Q8WUI4 952 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 CDK5RAP3Q96JB5 506 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 CCDC94Q9BW85 323 aaPredicted RBP9.52□□□□□ -0.89
PDE4D-209ENST00000502575 RHOBTB2Q9BYZ6 727 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 PLEKHA4Q9H4M7 779 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 UPF2Q9HAU5 1272 aaKnown RBP9.52□□□□□ -0.89
PDE4D-209ENST00000502575 PIDD1Q9HB75 910 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 BLOC1S4Q9NUP1 217 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 HCFC1R1Q9NWW0 138 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 MTRRQ9UBK8 725 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 DUSP12Q9UNI6 340 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 CDY1Q9Y6F8 540 aa9.52□□□□□ -0.89
PDE4D-209ENST00000502575 H0Y858 1186 aa9.51□□□□□ -0.89
PDE4D-209ENST00000502575 PODXLO00592 558 aa9.51□□□□□ -0.89
PDE4D-209ENST00000502575 CXCL8P10145 99 aa9.51□□□□□ -0.89
PDE4D-209ENST00000502575 NPR3P17342 541 aa9.51□□□□□ -0.89
PDE4D-209ENST00000502575 PLCG1P19174 1290 aa9.51□□□□□ -0.89
PDE4D-209ENST00000502575 TNFSF9P41273 254 aa9.51□□□□□ -0.89
PDE4D-209ENST00000502575 NCKAP1LP55160 1127 aa9.51□□□□□ -0.89
PDE4D-209ENST00000502575 CREMQ03060 361 aa9.51□□□□□ -0.89
PDE4D-209ENST00000502575 CUL4AQ13619 759 aa9.51□□□□□ -0.89
PDE4D-209ENST00000502575 NOLC1Q14978 699 aaKnown RBP eCLIP9.51□□□□□ -0.89
PDE4D-209ENST00000502575 SF3A1Q15459 793 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms