RNA–Protein interactions for RNA: ENST00000498539.1

LRCH4-210, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 3

Gene LRCH4, Length 819 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-210ENST00000498539 ZNF560Q96MR9 790 aa16.95■□□□□ 0.3
LRCH4-210ENST00000498539 AGAP1Q9UPQ3 857 aa16.95■□□□□ 0.3
LRCH4-210ENST00000498539 GREB1Q4ZG55 1949 aa16.95■□□□□ 0.3
LRCH4-210ENST00000498539 EXTL3O43909 919 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 IL18RAPO95256 599 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 PAPSS2O95340 614 aaPredicted RBP16.94■□□□□ 0.3
LRCH4-210ENST00000498539 F11P03951 625 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 ARSAP15289 507 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 ABCD1P33897 745 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 PXNP49023 591 aaPredicted RBP16.94■□□□□ 0.3
LRCH4-210ENST00000498539 BFSP1Q12934 665 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 CUL4AQ13619 759 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 TAF12Q16514 161 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 ITPRIPL2Q3MIP1 535 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 RRAGBQ5VZM2 374 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 TXNDC8Q6A555 127 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.94■□□□□ 0.3
LRCH4-210ENST00000498539 CMTM8Q8IZV2 173 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 GPR161Q8N6U8 529 aaKnown RBP16.94■□□□□ 0.3
LRCH4-210ENST00000498539 CELF5Q8N6W0 485 aaKnown RBP16.94■□□□□ 0.3
LRCH4-210ENST00000498539 CXorf38Q8TB03 319 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 NOC3LQ8WTT2 800 aaKnown RBP16.94■□□□□ 0.3
LRCH4-210ENST00000498539 C2orf15Q8WU43 125 aaKnown RBP16.94■□□□□ 0.3
LRCH4-210ENST00000498539 CBWD1Q9BRT8 395 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 EBF3Q9H4W6 596 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 GKN1Q9NS71 199 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 POLR3BQ9NW08 1133 aaPredicted RBP16.94■□□□□ 0.3
LRCH4-210ENST00000498539 RBAKQ9NYW8 714 aaPredicted RBP16.94■□□□□ 0.3
LRCH4-210ENST00000498539 MAGED2Q9UNF1 606 aaPredicted RBP16.94■□□□□ 0.3
LRCH4-210ENST00000498539 PCDHB5Q9Y5E4 795 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 PTPRDP23468 1912 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 PTPRJQ12913 1337 aa16.94■□□□□ 0.3
LRCH4-210ENST00000498539 SPAG17Q6Q759 2223 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 PRPF40AO75400 957 aaKnown RBP16.93■□□□□ 0.3
LRCH4-210ENST00000498539 IDEP14735 1019 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 WEE1P30291 646 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 PLCB2Q00722 1185 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 DDR2Q16832 855 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 DGKKQ5KSL6 1271 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 LMBRD2Q68DH5 695 aaPredicted RBP16.93■□□□□ 0.3
LRCH4-210ENST00000498539 FSTL4Q6MZW2 842 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 C1orf228Q6PIY5 440 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 LONP2Q86WA8 852 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 HSCBQ8IWL3 235 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 DCP1BQ8IZD4 617 aaKnown RBP16.93■□□□□ 0.3
LRCH4-210ENST00000498539 GLIS3Q8NEA6 775 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
LRCH4-210ENST00000498539 ACCSQ96QU6 501 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 PKMYT1Q99640 499 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 PANK2Q9BZ23 570 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 MTMR12Q9C0I1 747 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 PCIF1Q9H4Z3 704 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 SEL1LQ9UBV2 794 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 CCDC39Q9UFE4 941 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 SIX4Q9UIU6 781 aa16.93■□□□□ 0.3
LRCH4-210ENST00000498539 SRPRBQ9Y5M8 271 aaKnown RBP16.93■□□□□ 0.3
LRCH4-210ENST00000498539 PRR5-ARHGAP8B1AHC4 643 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 RETP07949 1114 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 GAP43P17677 238 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 CYP2F1P24903 491 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 ARHGAP8P85298 464 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 TSPY1Q01534 308 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 INTS6LQ5JSJ4 861 aaKnown RBP16.92■□□□□ 0.3
LRCH4-210ENST00000498539 FAM160A2Q8N612 972 aaPredicted RBP16.92■□□□□ 0.3
LRCH4-210ENST00000498539 TTC16Q8NEE8 873 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 HPS3Q969F9 1004 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 SNX21Q969T3 373 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 FAM83CQ9BQN1 747 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 PDE11AQ9HCR9 933 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 SEMA4GQ9NTN9 838 aa16.92■□□□□ 0.3
LRCH4-210ENST00000498539 DDX43Q9NXZ2 648 aaKnown RBP16.92■□□□□ 0.3
LRCH4-210ENST00000498539 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.91■□□□□ 0.3
LRCH4-210ENST00000498539 FRMD3A2A2Y4 597 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 GDF9O60383 454 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 PRPF6O94906 941 aaKnown RBP16.91■□□□□ 0.3
LRCH4-210ENST00000498539 AVPR1AP37288 418 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 PNPLA4P41247 253 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 STAT6P42226 847 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 POU5F1Q01860 360 aaKnown RBP16.91■□□□□ 0.3
LRCH4-210ENST00000498539 RUNX3Q13761 415 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 POSTNQ15063 836 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 CCDC6Q16204 474 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 SV2BQ7L1I2 683 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 USP28Q96RU2 1077 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 SLC22A12Q96S37 553 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 FBRSL1Q9HCM7 1045 aaKnown RBP16.91■□□□□ 0.3
LRCH4-210ENST00000498539 OLFML3Q9NRN5 406 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 GTF3C4Q9UKN8 822 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 EXOC7Q9UPT5 735 aa16.91■□□□□ 0.3
LRCH4-210ENST00000498539 SDK1Q7Z5N4 2213 aa16.9■□□□□ 0.3
LRCH4-210ENST00000498539 HUS1O60921 280 aa16.9■□□□□ 0.3
LRCH4-210ENST00000498539 EGFP01133 1207 aa16.9■□□□□ 0.3
LRCH4-210ENST00000498539 KRT19P08727 400 aa16.9■□□□□ 0.3
LRCH4-210ENST00000498539 SYT1P21579 422 aa16.9■□□□□ 0.3
LRCH4-210ENST00000498539 TXLNAP40222 546 aa16.9■□□□□ 0.3
LRCH4-210ENST00000498539 SMARCB1Q12824 385 aa16.9■□□□□ 0.3
LRCH4-210ENST00000498539 TMEM196Q5HYL7 178 aa16.9■□□□□ 0.3
LRCH4-210ENST00000498539 PRR23CQ6ZRP0 262 aa16.9■□□□□ 0.3
LRCH4-210ENST00000498539 CEP68Q76N32 757 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms