RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TRPC7Q9HCX4 862 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 HSFX1Q9UBD0 423 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 EBF1Q9UH73 591 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 NEUROG3Q9Y4Z2 214 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 STK24Q9Y6E0 443 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 TTC26A0AVF1 554 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 LACTBL1A8MY62 500 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 CDX4O14627 284 aaPredicted RBP12.62□□□□□ -0.39
CDK9-205ENST00000498339 SEC24BO95487 1268 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 BCKDHBP21953 392 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 LIG4P49917 911 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 LILRA4P59901 499 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 IRX4P78413 519 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 LMAN2Q12907 356 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 MAPK7Q13164 816 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 MTF1Q14872 753 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 TRIM61Q5EBN2 209 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 RINT1Q6NUQ1 792 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 ZPBP2Q6X784 338 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 ARMCX6Q7L4S7 300 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 THEM5Q8N1Q8 247 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 STKLD1Q8NE28 680 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 SPPL2BQ8TCT7 592 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 ATP2A3Q93084 1043 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 ZCWPW1Q9H0M4 648 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 ECT2Q9H8V3 914 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 DUS2Q9NX74 493 aaKnown RBP12.62□□□□□ -0.39
CDK9-205ENST00000498339 KLK13Q9UKR3 277 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 DSEQ9UL01 958 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 NOL7Q9UMY1 257 aaKnown RBP12.62□□□□□ -0.39
CDK9-205ENST00000498339 LOC400499M0QZD8 3231 aa12.62□□□□□ -0.39
CDK9-205ENST00000498339 FREM2Q5SZK8 3169 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 SPAARA0A1B0GVQ0 90 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
CDK9-205ENST00000498339 HNRNPDLO14979 420 aaKnown RBP12.61□□□□□ -0.39
CDK9-205ENST00000498339 MAP3K13O43283 966 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 CKMP06732 381 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 MAPTP10636 758 aaKnown RBP12.61□□□□□ -0.39
CDK9-205ENST00000498339 PLS3P13797 630 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 ATXN3P54252 364 aaPredicted RBP12.61□□□□□ -0.39
CDK9-205ENST00000498339 NLRP12P59046 1061 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 NBR1Q14596 966 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 KYAT1Q16773 422 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 C2orf27AQ580R0 203 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 JADE1Q6IE81 842 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 TMEM161BQ8NDZ6 487 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 CCDC26Q8TAB7 109 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 RIN3Q8TB24 985 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 C2orf15Q8WU43 125 aaKnown RBP12.61□□□□□ -0.39
CDK9-205ENST00000498339 C8orf76Q96K31 380 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 PYM1Q9BRP8 204 aaKnown RBP12.61□□□□□ -0.39
CDK9-205ENST00000498339 TIPINQ9BVW5 301 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 KCNG1Q9UIX4 513 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 TBX20Q9UMR3 447 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 WNT6Q9Y6F9 365 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 PKD1L2Q7Z442 2459 aa12.61□□□□□ -0.39
CDK9-205ENST00000498339 ATXN2Q99700 1313 aaKnown RBP12.61□□□□□ -0.39
CDK9-205ENST00000498339 LAMA5O15230 3695 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 PLXND1Q9Y4D7 1925 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 FASNP49327 2511 aaKnown RBP12.6□□□□□ -0.39
CDK9-205ENST00000498339 PP2D1A8MPX8 630 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 CYB561D2O14569 222 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 HAPLN1P10915 354 aaPredicted RBP12.6□□□□□ -0.39
CDK9-205ENST00000498339 RDXP35241 583 aaKnown RBP12.6□□□□□ -0.39
CDK9-205ENST00000498339 GPR15P49685 360 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 SIM1P81133 766 aaPredicted RBP12.6□□□□□ -0.39
CDK9-205ENST00000498339 SMARCB1Q12824 385 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 NR1H3Q13133 447 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 TMEM132DQ14C87 1099 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 ZBTB6Q15916 424 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 ENOX2Q16206 610 aaKnown RBP12.6□□□□□ -0.39
CDK9-205ENST00000498339 SPATA1Q5VX52 437 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 C1orf186Q6ZWK4 172 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 LPCAT2Q7L5N7 544 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 MDGA1Q8NFP4 955 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 SPIRE2Q8WWL2 714 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 HAPLN2Q9GZV7 340 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 BCCIPQ9P287 314 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDK9-205ENST00000498339 MSRB2Q9Y3D2 182 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 PCDHB5Q9Y5E4 795 aa12.6□□□□□ -0.39
CDK9-205ENST00000498339 DSPP15924 2871 aaKnown RBP12.6□□□□□ -0.39
CDK9-205ENST00000498339 TRAV19A0A0A6YYK7 116 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 H0YCG3 227 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 PRPF40AO75400 957 aaKnown RBP12.59□□□□□ -0.39
CDK9-205ENST00000498339 ALDH1A2O94788 518 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 F11P03951 625 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 CFIP05156 583 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 NFICP08651 508 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 CSH1P0DML2 217 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 CSH2P0DML3 217 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 GUCY2CP25092 1073 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 TSPY1Q01534 308 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 FAM160A1Q05DH4 1040 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 PDIA5Q14554 519 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 ZNF268Q14587 947 aaPredicted RBP12.59□□□□□ -0.39
CDK9-205ENST00000498339 SDHAF4Q5VUM1 108 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 C9orf57Q5W0N0 161 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 LMBRD2Q68DH5 695 aaPredicted RBP12.59□□□□□ -0.39
CDK9-205ENST00000498339 TMEM150AQ86TG1 271 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms