RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 DPP9Q86TI2 863 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 RASAL3Q86YV0 1011 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 NPLOC4Q8TAT6 608 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 ALG3Q92685 438 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 TBC1D31Q96DN5 1066 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 NLRP4Q96MN2 994 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 BCO2Q9BYV7 579 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 PHACTR1Q9C0D0 580 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 GNEQ9Y223 722 aaKnown RBP12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 Q9Y3F1 56 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 PCDHB4Q9Y5E5 795 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 H3BRB1 525 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 B4GALT5O43286 388 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 TNNC2P02585 160 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 IQCF3P0C7M6 154 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 COMTP21964 271 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 ASPAP45381 313 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 MAP2K5Q13163 448 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 CYP1B1Q16678 543 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 UBAP2Q5T6F2 1119 aaKnown RBP12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 CST9Q5W186 159 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 TMC3Q7Z5M5 1100 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 ANKRD36BP1Q96IX9 119 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 ZNF518BQ9C0D4 1074 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 MTMR12Q9C0I1 747 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 TUT1Q9H6E5 874 aaKnown RBP12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 UMODL1Q5DID0 1318 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 PDCD11Q14690 1871 aaKnown RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 INO80B-WBP1J3KQ70 363 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 ITGBL1O95965 494 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 GNA15P30679 374 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 ATICP31939 592 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 GRIK4Q16099 956 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 PLEKHA7Q6IQ23 1121 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 CCDC80Q76M96 950 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 C1orf131Q8NDD1 294 aaKnown RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 OR6J1Q8NGC5 347 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 FAM84AQ96KN4 292 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 RUNDC3BQ96NL0 473 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 TCHPQ9BT92 498 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 INO80BQ9C086 356 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 RETREG1Q9H6L5 497 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 GGT7Q9UJ14 662 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 BARX2Q9UMQ3 279 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 EVPLQ92817 2033 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 MROH7Q68CQ1 1323 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 MBLAC1A4D2B0 266 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 SKAP2O75563 359 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 F2P00734 622 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 CST3P01034 146 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 FGGP02679 453 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 DHX34Q14147 1143 aaKnown RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 GJC2Q5T442 439 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 GKAP1Q5VSY0 366 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 C12orf50Q8NA57 414 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 SELENOSQ9BQE4 189 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 TRAIPQ9BWF2 469 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 NACA2Q9H009 215 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 RPF1Q9H9Y2 349 aaKnown RBP12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 RRAGCQ9HB90 399 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 DERAQ9Y315 318 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 SCINQ9Y6U3 715 aa12.22□□□□□ -0.45
SNRNP200-208ENST00000497539 FAM187AA6NFU0 413 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 ENO4A6NNW6 628 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 GPR25O00155 361 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 TIMM44O43615 452 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 TSPAN1O60635 241 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 ZNF286BP0CG31 522 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 VDRP11473 427 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 DRD4P21917 467 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 NSFP46459 744 aaKnown RBP12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 MYL6P60660 151 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 ROR2Q01974 943 aaKnown RBP12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 ZNF211Q13398 564 aaPredicted RBP12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 SEZ6Q53EL9 994 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 THEMIS2Q5TEJ8 643 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 LIN9Q5TKA1 542 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 SLC30A9Q6PML9 568 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 TMEM270Q6UE05 265 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 ZFAND2BQ8WV99 257 aa12.21□□□□□ -0.45
SNRNP200-208ENST00000497539 A0A087WZ62 844 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 GOLGA6L10A0A0M3HER8 536 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 TCRBV5S1A1TA0A578 114 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 GJB1P08034 283 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 TMEM191BP0C7N4 346 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 HARSP12081 509 aaKnown RBP12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 EIF4BP23588 611 aaKnown RBP12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 PPP1R7Q15435 360 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 DCAF4L1Q3SXM0 396 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 HIBCHQ6NVY1 386 aaPredicted RBP12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 KIAA0319LQ8IZA0 1049 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 RBM41Q96IZ5 413 aaKnown RBP12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 ADAMTS10Q9H324 1103 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 ACTR5Q9H9F9 607 aaPredicted RBP12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 MRPL47Q9HD33 250 aaKnown RBP12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 BAIAP2L1Q9UHR4 511 aa12.21□□□□□ -0.46
SNRNP200-208ENST00000497539 GGA2Q9UJY4 613 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms